* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015848.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF03435.20
|
0.75
|
3
|
3370
|
opposite-strand
|
Saccharopine dehydrogenase NADP binding domain
|
2
|
PF13649.8
|
0.75
|
3
|
2514
|
same-strand
|
Methyltransferase domain
|
3
|
PF08241.14
|
0.75
|
3
|
2514
|
same-strand
|
Methyltransferase domain
|
4
|
PF08242.14
|
0.75
|
3
|
2514
|
same-strand
|
Methyltransferase domain
|
5
|
PF05050.14
|
0.75
|
3
|
506
|
opposite-strand
|
Methyltransferase FkbM domain
|
++ More..