* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000962.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF14081.8
|
1.0
|
2
|
4255.0
|
same-strand
|
Domain of unknown function (DUF4262)
|
2
|
PF00141.25
|
1.0
|
2
|
1873.0
|
same-strand
|
Peroxidase
|
3
|
PF01475.21
|
1.0
|
2
|
1387.5
|
same-strand
|
Ferric uptake regulator family
|
4
|
PF01161.22
|
1.0
|
2
|
330.5
|
same-strand
|
Phosphatidylethanolamine-binding protein
|
5
|
PF00107.28
|
1.0
|
2
|
5.0
|
same-strand
|
Zinc-binding dehydrogenase
|
6
|
PF13602.8
|
1.0
|
2
|
5.0
|
same-strand
|
Zinc-binding dehydrogenase
|
++ More..