* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015848.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00132.26
|
1.0
|
2
|
2033.0
|
same-strand
|
Bacterial transferase hexapeptide (six repeats)
|
2
|
PF14602.8
|
1.0
|
2
|
2033.0
|
same-strand
|
Hexapeptide repeat of succinyl-transferase
|
3
|
PF08889.13
|
1.0
|
2
|
555.0
|
same-strand
|
WbqC-like protein family
|
4
|
PF09594.12
|
1.0
|
2
|
56.0
|
same-strand
|
Glycosyltransferase family 87
|
5
|
PF08241.14
|
1.0
|
2
|
2252.5
|
opposite-strand
|
Methyltransferase domain
|
6
|
PF08242.14
|
1.0
|
2
|
2252.5
|
opposite-strand
|
Methyltransferase domain
|
++ More..