* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015848.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF04248.14
|
0.75
|
3
|
1917
|
opposite-strand
|
Domain of unknown function (DUF427)
|
2
|
PF12680.9
|
0.75
|
3
|
1526
|
same-strand
|
SnoaL-like domain
|
3
|
PF00654.22
|
0.75
|
3
|
-98
|
same-strand
|
Voltage gated chloride channel
|
4
|
PF00440.25
|
0.75
|
3
|
984
|
opposite-strand
|
Bacterial regulatory proteins, tetR family
|
5
|
PF04072.16
|
0.75
|
3
|
2766.5
|
opposite-strand
|
Leucine carboxyl methyltransferase
|
++ More..