* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015848.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00144.26
|
1.0
|
2
|
3202.0
|
opposite-strand
|
Beta-lactamase
|
2
|
PF08241.14
|
1.0
|
2
|
2512.0
|
same-strand
|
Methyltransferase domain
|
3
|
PF13649.8
|
1.0
|
2
|
2512.0
|
same-strand
|
Methyltransferase domain
|
4
|
PF13847.8
|
1.0
|
2
|
2512.0
|
same-strand
|
Methyltransferase domain
|
5
|
PF08242.14
|
1.0
|
2
|
2512.0
|
same-strand
|
Methyltransferase domain
|
6
|
PF07311.14
|
1.0
|
2
|
2086.0
|
same-strand
|
Dodecin
|
7
|
PF00535.28
|
1.0
|
2
|
554.0
|
opposite-strand
|
Glycosyl transferase family 2
|
8
|
PF05721.15
|
1.0
|
2
|
-89.0
|
opposite-strand
|
Phytanoyl-CoA dioxygenase (PhyH)
|
9
|
PF00132.26
|
1.0
|
2
|
2760.0
|
same-strand
|
Bacterial transferase hexapeptide (six repeats)
|
10
|
PF14602.8
|
1.0
|
2
|
2760.0
|
same-strand
|
Hexapeptide repeat of succinyl-transferase
|
++ More..