* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015848.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF02416.18
|
0.67
|
2
|
3825.0
|
opposite-strand
|
mttA/Hcf106 family
|
2
|
PF13344.8
|
0.67
|
2
|
2962.0
|
same-strand
|
Haloacid dehalogenase-like hydrolase
|
3
|
PF13242.8
|
0.67
|
2
|
2962.0
|
same-strand
|
HAD-hyrolase-like
|
4
|
PF03703.16
|
0.67
|
2
|
1172.5
|
same-strand
|
Bacterial PH domain
|
5
|
PF10609.11
|
0.67
|
2
|
11.0
|
same-strand
|
NUBPL iron-transfer P-loop NTPase
|
6
|
PF01883.21
|
0.67
|
2
|
11.0
|
same-strand
|
Iron-sulfur cluster assembly protein
|
7
|
PF01656.25
|
0.67
|
2
|
11.0
|
same-strand
|
CobQ/CobB/MinD/ParA nucleotide binding domain
|
8
|
PF06210.13
|
0.67
|
2
|
2556.0
|
same-strand
|
Protein of unknown function (DUF1003)
|
9
|
PF03448.19
|
0.67
|
2
|
3095.0
|
same-strand
|
MgtE intracellular N domain
|
10
|
PF00571.30
|
0.67
|
2
|
3095.0
|
same-strand
|
CBS domain
|
11
|
PF13828.8
|
0.67
|
2
|
4464.0
|
same-strand
|
Domain of unknown function (DUF4190)
|
++ More..