* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015848.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00252.20
|
1.0
|
2
|
4369.5
|
same-strand
|
Ribosomal protein L16p/L10e
|
2
|
PF00831.25
|
1.0
|
2
|
4136.5
|
same-strand
|
Ribosomal L29 protein
|
3
|
PF00366.22
|
1.0
|
2
|
3729.5
|
same-strand
|
Ribosomal protein S17
|
4
|
PF00884.25
|
1.0
|
2
|
1197.5
|
same-strand
|
Sulfatase
|
5
|
PF03781.18
|
1.0
|
2
|
250.5
|
same-strand
|
Sulfatase-modifying factor enzyme 1
|
6
|
PF14494.8
|
1.0
|
2
|
88.0
|
same-strand
|
Domain of unknown function (DUF4436)
|
7
|
PF00238.21
|
1.0
|
2
|
1433.5
|
same-strand
|
Ribosomal protein L14p/L23e
|
8
|
PF17136.6
|
1.0
|
2
|
1802.5
|
same-strand
|
Ribosomal proteins 50S L24/mitochondrial 39S L24
|
9
|
PF00467.31
|
1.0
|
2
|
1802.5
|
same-strand
|
KOW motif
|
10
|
PF00673.23
|
1.0
|
2
|
2119.5
|
same-strand
|
ribosomal L5P family C-terminus
|
11
|
PF00281.21
|
1.0
|
2
|
2119.5
|
same-strand
|
Ribosomal protein L5
|
12
|
PF00253.23
|
1.0
|
2
|
2687.5
|
same-strand
|
Ribosomal protein S14p/S29e
|
++ More..