* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015848.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00312.24
|
1.0
|
2
|
1380.5
|
opposite-strand
|
Ribosomal protein S15
|
2
|
PF06574.14
|
1.0
|
2
|
249.0
|
opposite-strand
|
FAD synthetase
|
3
|
PF01687.19
|
1.0
|
2
|
249.0
|
opposite-strand
|
Riboflavin kinase
|
4
|
PF02742.17
|
1.0
|
2
|
1682.0
|
same-strand
|
Iron dependent repressor, metal binding and dimerisation domain
|
5
|
PF01325.21
|
1.0
|
2
|
1682.0
|
same-strand
|
Iron dependent repressor, N-terminal DNA binding domain
|
6
|
PF04023.16
|
1.0
|
2
|
1682.0
|
same-strand
|
FeoA domain
|
7
|
PF00441.26
|
1.0
|
2
|
2429.0
|
opposite-strand
|
Acyl-CoA dehydrogenase, C-terminal domain
|
8
|
PF02770.21
|
1.0
|
2
|
2429.0
|
opposite-strand
|
Acyl-CoA dehydrogenase, middle domain
|
9
|
PF08028.13
|
1.0
|
2
|
2429.0
|
opposite-strand
|
Acyl-CoA dehydrogenase, C-terminal domain
|
10
|
PF02771.18
|
1.0
|
2
|
2429.0
|
opposite-strand
|
Acyl-CoA dehydrogenase, N-terminal domain
|
11
|
PF00108.25
|
1.0
|
2
|
3687.0
|
opposite-strand
|
Thiolase, N-terminal domain
|
++ More..