* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_015848.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF04452.16
|
1.0
|
2
|
2396.0
|
opposite-strand
|
RNA methyltransferase
|
2
|
PF01556.20
|
1.0
|
2
|
1234.0
|
opposite-strand
|
DnaJ C terminal domain
|
3
|
PF00226.33
|
1.0
|
2
|
1234.0
|
opposite-strand
|
DnaJ domain
|
4
|
PF00684.21
|
1.0
|
2
|
1234.0
|
opposite-strand
|
DnaJ central domain
|
5
|
PF01628.23
|
1.0
|
2
|
128.0
|
opposite-strand
|
HrcA protein C terminal domain
|
6
|
PF03621.15
|
1.0
|
2
|
947.0
|
opposite-strand
|
MbtH-like protein
|
7
|
PF00501.30
|
1.0
|
2
|
2432.0
|
opposite-strand
|
AMP-binding enzyme
|
8
|
PF00668.22
|
1.0
|
2
|
2432.0
|
opposite-strand
|
Condensation domain
|
9
|
PF13193.8
|
1.0
|
2
|
2432.0
|
opposite-strand
|
AMP-binding enzyme C-terminal domain
|
10
|
PF00550.27
|
1.0
|
2
|
2432.0
|
opposite-strand
|
Phosphopantetheine attachment site
|
++ More..