Result : A0R0B3
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | Meromycolate extension acyl carrier protein (ACP) |
| NCBI Accession ID | CP000480.1 |
| Organism | Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis) |
| Left | 4413021 |
| Right | 4413320 |
| Strand | + |
| Nucleotide Sequence | GTGGCCGCCACCCAGGAAGAAATCATCGCCGGTCTCGCCGAGATCATCGAAGAGGTCACCGGTATCGAGCCGTCCGAGGTCACCCCGGAGAAGTCGTTCGTCGACGACCTGGACATCGACTCGCTGTCGATGGTCGAGATCGCGGTGCAGACCGAGGACAAGTACGGCGTGAAGATCCCGGACGAGGATCTGGCCGGTCTGCGCACCGTGGGCGACGTGGTTGCCTACATCCAGAAGCTCGAGGAAGAGAACCCCGAGGCCGCTGCTGCCCTGCGTGAGAAGTTCGCGGCAGACCAGTGA |
| Sequence | MAATQEEIIAGLAEIIEEVTGIEPSEVTPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLEEENPEAAAALREKFAADQ |
| Source of smORF | Swiss-Prot |
| Function | Acyl carrier protein involved in meromycolate extension. {ECO:0000250}. |
| Pubmed ID | 17295914 18955433 20094657 |
| Domain | CDD:415812 |
| Functional Category | Others |
| Uniprot ID | A0R0B3 |
| ORF Length (Amino Acid) | 99 |
++ More..
| Conservation Analysis |
No. of Species: 155
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 4413779 | 4414078 | + | NZ_LN831039.1 | Mycolicibacterium smegmatis |
| 2 | 3945198 | 3945497 | - | NZ_CP012150.1 | Mycobacterium goodii |
| 3 | 7511258 | 7511557 | + | NZ_AP022567.1 | Mycolicibacterium mageritense |
| 4 | 2728845 | 2729144 | - | NZ_CP020809.1 | Mycobacterium dioxanotrophicus |
| 5 | 3094509 | 3094805 | - | NZ_AP022574.1 | Mycolicibacterium psychrotolerans |
| 6 | 1990123 | 1990416 | + | NZ_AP022620.1 | Mycolicibacterium anyangense |
| 7 | 971612 | 971905 | - | NZ_AP022586.1 | Mycolicibacterium litorale |
| 8 | 2494171 | 2494464 | + | NZ_AP022605.1 | Mycobacterium doricum |
| 9 | 1284097 | 1284390 | - | NZ_AP022617.1 | Mycolicibacterium monacense |
| 10 | 2839879 | 2840181 | - | NZ_CP059694.1 | Gordonia rubripertincta |
| 11 | 2641533 | 2641835 | - | NZ_CP027114.1 | Gordonia alkanivorans |
| 12 | 4708864 | 4709160 | + | NZ_CP043474.1 | Mycobacterium grossiae |
| 13 | 3689629 | 3689922 | + | NZ_AP022610.1 | Mycolicibacterium madagascariense |
| 14 | 1413432 | 1413731 | + | NZ_AP022603.1 | Mycolicibacterium fallax |
| 15 | 3778704 | 3779000 | - | NZ_AP022579.1 | Mycolicibacterium boenickei |
| 16 | 5805252 | 5805545 | + | NZ_AP022600.1 | Mycolicibacterium tokaiense |
| 17 | 1583092 | 1583394 | - | NZ_AP022595.1 | Mycolicibacterium sarraceniae |
| 18 | 3438465 | 3438761 | - | NZ_AP022595.1 | Mycolicibacterium sarraceniae |
| 19 | 3865757 | 3866053 | + | NZ_CP011269.1 | Mycolicibacterium fortuitum |
| 20 | 1835369 | 1835665 | - | NZ_AP022612.1 | Mycolicibacterium confluentis |
| 21 | 5932388 | 5932681 | - | NZ_AP022593.1 | Mycolicibacterium arabiense |
| 22 | 243126 | 243422 | - | NZ_AP022565.1 | Mycolicibacterium alvei |
| 23 | 1904085 | 1904378 | + | NZ_AP022616.1 | Mycolicibacterium phocaicum |
| 24 | 5247709 | 5248002 | - | NZ_AP022577.1 | Mycolicibacterium aubagnense |
| 25 | 1905885 | 1906187 | - | NZ_LT906483.1 | Mycolicibacterium thermoresistibile |
| 26 | 1867831 | 1868124 | - | NZ_CP062008.1 | Mycolicibacterium mucogenicum DSM 44124 |
| 27 | 1960268 | 1960564 | - | NZ_LR134355.1 | Mycolicibacterium chitae |
| 28 | 3493126 | 3493368 | + | NZ_AP022561.1 | Mycolicibacterium aichiense |
| 29 | 6370952 | 6371248 | + | NZ_AP022596.1 | Mycolicibacterium helvum |
| 30 | 1791418 | 1791720 | - | NZ_AP022596.1 | Mycolicibacterium helvum |
| 31 | 1652398 | 1652697 | - | NZ_CP024633.1 | Mycobacteroides salmoniphilum |
| 32 | 1908684 | 1908983 | - | NZ_CP007220.1 | Mycobacteroides chelonae CCUG 47445 |
| 33 | 1172646 | 1172945 | - | NZ_AP022609.1 | Mycolicibacter hiberniae |
| 34 | 1649464 | 1649763 | - | NZ_CP010271.1 | Mycobacteroides saopaulense |
| 35 | 1776583 | 1776882 | - | NZ_AP018165.1 | [Mycobacterium] stephanolepidis |
| 36 | 2025998 | 2026297 | - | NZ_CP011530.1 | Mycobacteroides immunogenum |
| 37 | 1868621 | 1868929 | - | NZ_CP014955.1 | Mycobacteroides abscessus |
| 38 | 234399 | 234701 | + | NZ_AP022562.1 | Mycobacterium novum |
| 39 | 1805466 | 1805768 | - | NC_015576.1 | Mycolicibacter sinensis |
| 40 | 1697771 | 1698016 | - | NZ_LT906469.1 | Mycolicibacter terrae |
| 41 | 1556093 | 1556410 | - | NZ_LR026975.1 | Mycolicibacterium hassiacum DSM 44199 |
| 42 | 2170602 | 2170955 | - | NZ_AP024310.1 | Mycobacterium heckeshornense |
| 43 | 3714239 | 3714538 | + | NZ_CP011491.1 | Mycolicibacterium vaccae 95051 |
| 44 | 3995913 | 3996212 | + | NC_008726.1 | Mycolicibacterium vanbaalenii PYR-1 |
| 45 | 4106473 | 4106775 | + | NZ_AP022570.1 | Mycolicibacterium poriferae |
| 46 | 3740347 | 3740646 | + | NZ_LR134356.1 | Mycolicibacterium aurum |
| 47 | 3657070 | 3657417 | - | NZ_AP022606.1 | Mycobacterium branderi |
| 48 | 4710038 | 4710391 | + | NZ_AP022583.1 | Mycobacterium noviomagense |
| 49 | 891925 | 892224 | - | NZ_AP022563.1 | Mycolicibacterium duvalii |
| 50 | 3271106 | 3271417 | + | NZ_CP027793.1 | Rhodococcus hoagii |
| 51 | 3619744 | 3620043 | - | NZ_AP022598.1 | Mycolicibacterium parafortuitum |
| 52 | 5885678 | 5885926 | + | NZ_AP017900.1 | Nocardia seriolae |
| 53 | 5740948 | 5741253 | + | NZ_AP017900.1 | Nocardia seriolae |
| 54 | 3495228 | 3495527 | - | NZ_AP022589.1 | Mycolicibacter minnesotensis |
| 55 | 3125597 | 3125875 | + | NZ_CP029146.1 | Rhodococcus ruber |
| 56 | 1327031 | 1327357 | + | NZ_AP022569.1 | Mycobacterium cookii |
| 57 | 2711074 | 2711373 | + | NZ_LR134352.1 | Nocardia asteroides |
| 58 | 4790301 | 4790609 | - | NZ_LR134352.1 | Nocardia asteroides |
| 59 | 2830483 | 2830788 | + | NC_014158.1 | Tsukamurella paurometabola DSM 20162 |
| 60 | 2920717 | 2921019 | + | NZ_CP027433.1 | Gordonia iterans |
| 61 | 1742519 | 1742818 | + | NZ_CP018082.1 | Nocardia mangyaensis |
| 62 | 3296459 | 3296737 | + | NZ_LT906450.1 | Rhodococcus rhodochrous |
| 63 | 135799 | 136104 | - | NZ_CP033972.1 | Gordonia insulae |
| 64 | 2404584 | 2404931 | + | NZ_AP022581.1 | Mycobacterium lacus |
| 65 | 3123840 | 3124145 | + | NZ_CP019066.1 | Tsukamurella tyrosinosolvens |
| 66 | 3619335 | 3619613 | + | NZ_CP022208.1 | Rhodococcus pyridinivorans |
| 67 | 3347017 | 3347322 | + | NC_013441.1 | Gordonia bronchialis DSM 43247 |
| 68 | 1270343 | 1270642 | - | NC_015564.1 | Hoyosella subflava DQS3-9A1 |
| 69 | 4819137 | 4819484 | - | NZ_AP022568.1 | Mycobacterium simiae |
| 70 | 2517771 | 2518118 | + | NC_000962.3 | Mycobacterium tuberculosis H37Rv |
| 71 | 2570615 | 2570962 | + | NC_015848.1 | Mycobacterium canettii CIPT 140010059 |
| 72 | 2774633 | 2774935 | + | NZ_CP011853.1 | Gordonia phthalatica |
| 73 | 1439838 | 1440149 | - | NZ_CP048813.1 | Rhodococcus triatomae |
| 74 | 3766242 | 3766517 | + | NZ_AP023172.1 | Rhodococcus qingshengii |
| 75 | 4519962 | 4520237 | - | NZ_LS483468.1 | Rhodococcus coprophilus |
| 76 | 4011089 | 4011391 | - | NZ_CP015235.1 | Rhodococcus fascians D188 |
| 77 | 1537838 | 1538080 | - | NZ_CP041695.1 | Nocardia otitidiscaviarum |
| 78 | 7533713 | 7533994 | - | NZ_CP041695.1 | Nocardia otitidiscaviarum |
| 79 | 1360695 | 1360946 | - | NZ_CP015449.1 | Dietzia lutea |
| 80 | 4063859 | 4064101 | - | NZ_CP022088.2 | Nocardia brasiliensis |
| 81 | 514961 | 515266 | + | NZ_CP022088.2 | Nocardia brasiliensis |
| 82 | 1768553 | 1768795 | + | NC_006361.1 | Nocardia farcinica IFM 10152 |
| 83 | 5895317 | 5895562 | - | NZ_CP026746.1 | Nocardia cyriacigeorgica |
| 84 | 1948220 | 1948513 | - | NZ_CP009360.4 | Mycobacterium avium subsp. hominissuis |
| 85 | 3356654 | 3356998 | + | NZ_AP018164.1 | Mycobacterium shigaense |
| 86 | 5785947 | 5786192 | + | NZ_AP023396.1 | Nocardia wallacei |
| 87 | 1164017 | 1164364 | - | NZ_AP022575.1 | Mycobacterium shinjukuense |
| 88 | 1334027 | 1334278 | - | NZ_CP015453.1 | Dietzia psychralcaliphila |
| 89 | 2053811 | 2054101 | - | NZ_CP023147.1 | Mycobacterium marseillense |
| 90 | 2101294 | 2101638 | + | NZ_AP022582.1 | Mycobacterium seoulense |
| 91 | 4889075 | 4889365 | + | NZ_AP022588.1 | Mycolicibacterium sediminis |
| 92 | 1386314 | 1386562 | - | NZ_CP015961.1 | Dietzia timorensis |
| 93 | 4033910 | 4034257 | - | NZ_AP022615.1 | Mycobacterium heidelbergense |
| 94 | 895122 | 895469 | - | NZ_AP022614.1 | Mycobacterium parmense |
| 95 | 4604645 | 4604992 | + | NZ_AP022572.1 | Mycobacterium shottsii |
| 96 | 5421398 | 5421745 | + | NZ_CP058277.1 | Mycobacterium marinum |
| 97 | 96363 | 96710 | - | NZ_AP022587.1 | Mycobacterium stomatepiae |
| 98 | 42896 | 43243 | - | NZ_AP022576.1 | Mycobacterium florentinum |
| 99 | 3388486 | 3388731 | + | NZ_AP022618.1 | Mycolicibacterium insubricum |
| 100 | 1953996 | 1954343 | + | NZ_AP022590.1 | Mycobacterium mantenii |
| 101 | 3438523 | 3438870 | + | NZ_LR130759.1 | Mycobacterium basiliense |
| 102 | 2288600 | 2288947 | - | NC_016946.1 | Mycobacterium intracellulare ATCC 13950 |
| 103 | 2196417 | 2196764 | - | NC_016948.1 | Mycobacterium paraintracellulare |
| 104 | 1377858 | 1378202 | + | NZ_AP022619.1 | Mycobacterium paraseoulense |
| 105 | 3490786 | 3491133 | + | NZ_AP022613.1 | Mycobacterium conspicuum |
| 106 | 2645806 | 2646153 | + | NZ_CP011883.2 | Mycobacterium haemophilum DSM 44634 |
| 107 | 765217 | 765564 | + | NC_022663.1 | Mycobacterium kansasii ATCC 12478 |
| 108 | 1947208 | 1947555 | + | NZ_CP029543.1 | Mycobacterium leprae |
| 109 | 301588 | 301887 | - | NZ_AP022608.1 | Mycolicibacterium gadium |
| 110 | 2135487 | 2135786 | + | NZ_AP022601.1 | Mycobacterium gallinarum |
| 111 | 2985682 | 2985981 | - | NZ_AP022560.1 | Mycolicibacterium moriokaense |
| 112 | 1651164 | 1651421 | - | NZ_CP009312.1 | Lawsonella clevelandensis |
| 113 | 2135833 | 2136075 | - | NZ_AP018920.1 | Pseudonocardia autotrophica |
| 114 | 2277284 | 2277526 | - | NC_015312.1 | Pseudonocardia dioxanivorans CB1190 |
| 115 | 5646323 | 5646571 | - | NZ_CP048882.1 | Streptomyces bathyalis |
| 116 | 2358940 | 2359188 | + | NZ_CP040752.1 | Streptomyces rectiverticillatus |
| 117 | 2820902 | 2821150 | + | NZ_CP023691.1 | Streptomyces platensis |
| 118 | 3634780 | 3635025 | - | NC_009664.2 | Kineococcus radiotolerans SRS30216 = ATCC BAA-149 |
| 119 | 1816550 | 1816798 | + | NZ_CP032229.1 | Streptomyces seoulensis |
| 120 | 491777 | 492025 | - | NZ_CP044548.2 | Janibacter melonis |
| 121 | 1614627 | 1614875 | + | NC_016111.1 | Streptomyces cattleya NRRL 8057 = DSM 46488 |
| 122 | 3511338 | 3511586 | + | NZ_CP070326.1 | Streptomyces noursei |
| 123 | 5919812 | 5920060 | - | NZ_CP011340.1 | Streptomyces pristinaespiralis |
| 124 | 2541595 | 2541843 | + | NZ_CP063374.1 | Streptomyces chromofuscus |
| 125 | 429841 | 430089 | - | NZ_CP018135.1 | Neomicrococcus aestuarii |
| 126 | 3519742 | 3519990 | + | NZ_CP031455.1 | Streptomyces olivoreticuli subsp. olivoreticuli |
| 127 | 2939289 | 2939537 | + | NZ_CP027306.1 | Streptomyces atratus |
| 128 | 3428729 | 3428977 | + | NZ_CP034463.1 | Streptomyces aquilus |
| 129 | 5283417 | 5283665 | - | NZ_CP023202.1 | Streptomyces xinghaiensis S187 |
| 130 | 6956501 | 6956749 | - | NZ_CP023699.1 | Streptomyces kanamyceticus |
| 131 | 2120680 | 2120928 | - | NZ_CP063373.1 | Streptomyces ferrugineus |
| 132 | 8256739 | 8256981 | + | NZ_CP032698.1 | Streptomyces hundungensis |
| 133 | 2443326 | 2443574 | + | NZ_CP023693.1 | Streptomyces cinereoruber |
| 134 | 1833368 | 1833616 | + | NZ_CP031194.1 | Streptomyces paludis |
| 135 | 6066771 | 6067019 | - | NZ_CP030073.1 | Streptomyces cadmiisoli |
| 136 | 2395044 | 2395292 | + | NZ_CP045529.1 | Luteimicrobium xylanilyticum |
| 137 | 2258169 | 2258417 | + | NZ_CP029196.1 | Streptomyces venezuelae |
| 138 | 1964551 | 1964802 | + | NZ_CP013290.1 | Janibacter indicus |
| 139 | 3101602 | 3101850 | + | NZ_CP041694.1 | Cellulosimicrobium cellulans |
| 140 | 2692655 | 2692903 | + | NZ_CP010407.1 | Streptomyces vietnamensis |
| 141 | 1641292 | 1641537 | - | NZ_CP049257.1 | Nocardioides anomalus |
| 142 | 1298359 | 1298610 | - | NZ_CP033325.1 | Georgenia faecalis |
| 143 | 2068933 | 2069181 | + | NZ_CP049934.1 | Leucobacter insecticola |
| 144 | 369058 | 369306 | - | NZ_CP049253.1 | Microbacterium amylolyticum |
| 145 | 1889153 | 1889401 | - | NZ_CP016282.1 | Cryobacterium arcticum |
| 146 | 315131 | 315379 | - | NZ_CP014209.1 | Isoptericola dokdonensis DS-3 |
| 147 | 3499066 | 3499314 | + | NZ_CP032624.1 | Gryllotalpicola protaetiae |
| 148 | 388476 | 388724 | + | NZ_CP030033.1 | Cryobacterium soli |
| 149 | 375095 | 375343 | - | NZ_CP060716.1 | Leucobacter denitrificans |
| 150 | 2279761 | 2280006 | - | NZ_LT996886.1 | Tessaracoccus timonensis |
| 151 | 1855130 | 1855381 | - | NZ_CP026734.1 | Brevibacterium linens |
| 152 | 2012753 | 2013004 | - | NZ_CP025333.1 | Brevibacterium aurantiacum |
| 153 | 2705803 | 2706054 | - | NZ_CP065682.1 | Brevibacterium casei |
| 154 | 1664012 | 1664260 | + | NZ_CP026949.1 | Mycetocola zhujimingii |
| 155 | 1656473 | 1656721 | - | NZ_CP071883.1 | Curtobacterium flaccumfaciens pv. flaccumfaciens |
| 156 | 191424 | 191672 | + | NZ_CP033719.1 | Propionibacterium acidifaciens |
| 157 | 912533 | 912784 | + | NZ_CP035810.1 | Brevibacterium luteolum |
| 158 | 1765957 | 1766205 | + | NZ_CP015515.1 | Rathayibacter tritici |
| 159 | 2290962 | 2291210 | + | NZ_CP038213.1 | Ornithinimicrobium flavum |
| 160 | 1466716 | 1466964 | + | NZ_CP028129.1 | Rathayibacter rathayi |
| 161 | 1606103 | 1606351 | - | NZ_CP035037.1 | Leucobacter muris |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LN831039.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF11253.10 | 0.68 | 105 | 6198 | opposite-strand | Protein of unknown function (DUF3052) |
| 2 | PF17831.3 | 0.78 | 121 | 2566 | same-strand | Pyruvate dehydrogenase E1 component middle domain |
| 3 | PF13556.8 | 0.98 | 152 | 1195.0 | same-strand | PucR C-terminal helix-turn-helix domain |
| 4 | PF17853.3 | 0.98 | 152 | 1194.0 | same-strand | GGDEF-like domain |
| 5 | PF00698.23 | 0.75 | 117 | 125 | same-strand | Acyl transferase domain |
| 6 | PF00109.28 | 0.97 | 151 | 70 | same-strand | Beta-ketoacyl synthase, N-terminal domain |
| 7 | PF02801.24 | 0.97 | 150 | 70 | same-strand | Beta-ketoacyl synthase, C-terminal domain |
| 8 | PF01039.24 | 0.68 | 105 | 2574 | same-strand | Carboxyl transferase domain |
++ More..