Protein Information |
Information Type | Description |
---|---|
Protein name | EXP01890 |
NCBI Accession ID | CP000480.1 |
Organism | Mycolicibacterium smegmatis MC2 155 |
Left | 1260962 |
Right | 1261045 |
Strand | - |
Nucleotide Sequence | GTGTCCACCTTCACCCCGCGCCGCAGCGCCCACATCATCGGCAGCGCGCAGTCGGTGGCACCGAACGGCAGGTCCGCCGTGTAG |
Sequence | VSTFTPRRSAHIIGSAQSVAPNGRSAV |
Source of smORF | Transcriptional-level |
Function | |
Pubmed ID | 32181921 |
Domain | |
Functional Category | Function not yet assigned |
Uniprot ID | |
ORF Length (Amino Acid) | 27 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 1286608 | 1286691 | - | NZ_LN831039.1 | Mycolicibacterium smegmatis |
2 | 7015192 | 7015275 | + | NZ_CP012150.1 | Mycobacterium goodii |
3 | 1995975 | 1996046 | - | NZ_CP011805.1 | Pelagerythrobacter marensis |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF01551.24 | 0.67 | 2 | 1779.0 | same-strand | Peptidase family M23 |