* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LN831039.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF01152.23
|
1.0
|
2
|
2699.5
|
opposite-strand
|
Bacterial-like globin
|
2
|
PF00128.26
|
1.0
|
2
|
1161.5
|
opposite-strand
|
Alpha amylase, catalytic domain
|
3
|
PF13279.8
|
1.0
|
2
|
62.0
|
same-strand
|
Thioesterase-like superfamily
|
4
|
PF05088.14
|
1.0
|
2
|
-53.0
|
same-strand
|
Bacterial NAD-glutamate dehydrogenase
|
5
|
PF00005.29
|
1.0
|
2
|
4867.0
|
same-strand
|
ABC transporter
|
6
|
PF12848.9
|
1.0
|
2
|
4867.0
|
same-strand
|
ABC transporter
|
7
|
PF00436.27
|
1.0
|
2
|
6648.0
|
same-strand
|
Single-strand binding protein family
|
8
|
PF09678.12
|
1.0
|
2
|
7443.5
|
same-strand
|
Cytochrome c oxidase caa3 assembly factor (Caa3 CtaG)
|
9
|
PF05425.15
|
1.0
|
2
|
7443.5
|
same-strand
|
Copper resistance protein D
|
10
|
PF19277.1
|
1.0
|
2
|
9527.0
|
same-strand
|
Glycerol-3-phosphate acyltransferase C-terminal region
|
11
|
PF01553.23
|
1.0
|
2
|
9546
|
same-strand
|
Acyltransferase
|
++ More..