* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LN831039.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF12900.9
|
1.0
|
2
|
4158.0
|
same-strand
|
Pyridoxamine 5'-phosphate oxidase
|
2
|
PF00857.22
|
1.0
|
2
|
3565.0
|
same-strand
|
Isochorismatase family
|
3
|
PF00459.27
|
1.0
|
2
|
2781.5
|
same-strand
|
Inositol monophosphatase family
|
4
|
PF01583.22
|
1.0
|
2
|
936.0
|
same-strand
|
Adenylylsulphate kinase
|
5
|
PF00009.29
|
1.0
|
2
|
936.0
|
same-strand
|
Elongation factor Tu GTP binding domain
|
6
|
PF01926.25
|
1.0
|
2
|
936.0
|
same-strand
|
50S ribosome-binding GTPase
|
7
|
PF03144.27
|
1.0
|
2
|
936.0
|
same-strand
|
Elongation factor Tu domain 2
|
8
|
PF01507.21
|
1.0
|
2
|
1.0
|
same-strand
|
Phosphoadenosine phosphosulfate reductase family
|
9
|
PF07690.18
|
1.0
|
2
|
70.5
|
same-strand
|
Major Facilitator Superfamily
|
10
|
PF03061.24
|
1.0
|
2
|
2940.0
|
opposite-strand
|
Thioesterase superfamily
|
11
|
PF14539.8
|
1.0
|
2
|
2940.0
|
opposite-strand
|
Domain of unknown function (DUF4442)
|
++ More..