* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LN831039.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF17301.4
|
1.0
|
2
|
3144.0
|
same-strand
|
Putative lipoprotein LpqV
|
2
|
PF01734.24
|
1.0
|
2
|
241.0
|
both-strands
|
Patatin-like phospholipase
|
3
|
PF08240.14
|
1.0
|
2
|
2082.5
|
same-strand
|
Alcohol dehydrogenase GroES-like domain
|
4
|
PF00107.28
|
1.0
|
2
|
2082.5
|
same-strand
|
Zinc-binding dehydrogenase
|
5
|
PF13602.8
|
1.0
|
2
|
2082.5
|
same-strand
|
Zinc-binding dehydrogenase
|
6
|
PF19328.1
|
1.0
|
2
|
3076.5
|
opposite-strand
|
2,4-diaminopentanoate dehydrogenase C-terminal domain
|
++ More..