* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP012150.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00326.23
|
1.0
|
2
|
4306.5
|
opposite-strand
|
Prolyl oligopeptidase family
|
2
|
PF01116.22
|
1.0
|
2
|
3454.0
|
same-strand
|
Fructose-bisphosphate aldolase class-II
|
3
|
PF07005.13
|
1.0
|
2
|
2180.0
|
same-strand
|
Sugar-binding N-terminal domain
|
4
|
PF17042.7
|
1.0
|
2
|
2180.0
|
same-strand
|
Nucleotide-binding C-terminal domain
|
5
|
PF07690.18
|
1.0
|
2
|
813.0
|
same-strand
|
Major Facilitator Superfamily
|
6
|
PF00392.23
|
1.0
|
2
|
-3
|
same-strand
|
Bacterial regulatory proteins, gntR family
|
7
|
PF07729.14
|
1.0
|
2
|
-3
|
same-strand
|
FCD domain
|
8
|
PF08666.14
|
1.0
|
2
|
47.0
|
same-strand
|
SAF domain
|
++ More..