* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LN831039.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF13578.8
|
1.0
|
3
|
4138
|
same-strand
|
Methyltransferase domain
|
2
|
PF08484.13
|
1.0
|
3
|
2887
|
opposite-strand
|
C-methyltransferase C-terminal domain
|
3
|
PF13489.8
|
1.0
|
3
|
2887
|
opposite-strand
|
Methyltransferase domain
|
4
|
PF08241.14
|
1.0
|
3
|
2887
|
opposite-strand
|
Methyltransferase domain
|
5
|
PF13649.8
|
1.0
|
3
|
2887
|
opposite-strand
|
Methyltransferase domain
|
6
|
PF08242.14
|
1.0
|
3
|
2887
|
opposite-strand
|
Methyltransferase domain
|
7
|
PF03621.15
|
1.0
|
3
|
-3
|
same-strand
|
MbtH-like protein
|
8
|
PF00668.22
|
1.0
|
3
|
5360.0
|
same-strand
|
Condensation domain
|
9
|
PF00501.30
|
1.0
|
3
|
5360.0
|
same-strand
|
AMP-binding enzyme
|
10
|
PF00550.27
|
1.0
|
3
|
5360.0
|
same-strand
|
Phosphopantetheine attachment site
|
11
|
PF13193.8
|
1.0
|
3
|
5360.0
|
same-strand
|
AMP-binding enzyme C-terminal domain
|
12
|
PF07993.14
|
1.0
|
3
|
10534
|
same-strand
|
Male sterility protein
|
13
|
PF11139.10
|
1.0
|
3
|
18231
|
same-strand
|
Sap, sulfolipid-1-addressing protein
|
++ More..