ProsmORF-pred
Result : EXP01671
Protein Information
Information Type Description
Protein name EXP01671
NCBI Accession ID NC_017381.1
Organism Helicobacter pylori 2018
Left 277349
Right 277603
Strand +
Nucleotide Sequence ATGTCATTATTAGTGAATGATGAATGCATTGCGTGTGATGCTTGCAGAGAAGAATGCCCTAGTGAGGCGATTGAAGAGGGTGATCCCATTTATAGTATTGATCCAGATCGATGCACGGAGTGTTACGGGTATGATGATGATGAGCCTCGTTGCGTGAGCGTATGCCCTGTAGATGCGATTTTACCGGATCCTAACAACGCAGAGAGCAAAGAGGAATTGAAATACAAATACGAAATCTTAAAAGAGCAAGACTAA
Sequence MSLLVNDECIACDACREECPSEAIEEGDPIYSIDPDRCTECYGYDDDEPRCVSVCPVDAILPDPNNAESKEELKYKYEILKEQD
Source of smORF Protein-level
Function The ORF matches to the profile of NF033683. Profile Description: YfhL family 4Fe-4S dicluster ferredoxin.
The ORF matches to the profile of pfam12838. Profile Description: 4Fe-4S dicluster domain. Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
The ORF matches to the profile of COG1146. Profile Description: NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit [Nucleotide transport and metabolism].
Pubmed ID 30796087
Domain CDD:403902,CDD:411280,CDD:224069
Functional Category Conserved domain based functional assignment
Uniprot ID
ORF Length (Amino Acid) 84
++ More..
Conservation Analysis
Conservation Analysis
No. of Species: 542
Sr.No. Left Position Right Position Strand NCBI Accession id Species Name
1 274780 275031 + NC_017379.1 Helicobacter pylori Puno135
2 460009 460260 + NC_008229.1 Helicobacter acinonychis str. Sheeba
3 490675 490926 - NC_017735.1 Helicobacter cetorum MIT 99-5656
4 1880575 1880826 + NC_014935.1 Nitratifractor salsuginis DSM 16511
5 654978 655232 - NC_014810.2 Helicobacter felis ATCC 49179
6 300558 300809 + NZ_LS483446.1 Helicobacter mustelae
7 1803714 1803965 - NC_005090.1 Wolinella succinogenes DSM 1740
8 962357 962608 - NC_004917.1 Helicobacter hepaticus ATCC 51449
9 466489 466740 - NZ_CP063087.1 Helicobacter winghamensis
10 490165 490422 - NZ_AP022826.1 Nitrosophilus labii
11 143349 143600 + NZ_AP018676.1 Helicobacter cinaedi
12 1911077 1911328 - NZ_AP023212.1 Hydrogenimonas urashimensis
13 2170272 2170526 - NZ_CP032097.1 Arcobacter ellisii
14 166292 166543 + NZ_LN907858.1 Helicobacter typhlonius
15 413397 413648 - NZ_CP063164.1 Sulfurovum indicum
16 1430103 1430354 + NZ_AP022847.1 Nitrosophilus alvini
17 677546 677800 - NC_007575.1 Sulfurimonas denitrificans DSM 1251
18 1975182 1975436 - NZ_CP030944.1 Arcobacter aquimarinus
19 2079986 2080240 - NZ_CP053833.1 Arcobacter cloacae
20 2411196 2411450 - NZ_CP053835.1 Arcobacter defluvii
21 1709936 1710190 - NC_017187.1 Aliarcobacter butzleri ED-1
22 438973 439224 - NZ_CP011308.1 Sulfurovum lithotrophicum
23 2097422 2097676 - NZ_CP053836.1 Halarcobacter ebronensis
24 85310 85561 - NZ_CP014991.1 Helicobacter himalayensis
25 1959936 1960187 - NZ_CP021886.1 Helicobacter apodemus
26 1474440 1474694 - NZ_CP036246.2 [Arcobacter] porcinus
27 1404995 1405249 - NZ_CP032099.1 Aliarcobacter skirrowii CCUG 10374
28 823145 823399 + NZ_CP031217.1 Halarcobacter bivalviorum
29 1757544 1757798 - NZ_CP035928.1 Malaciobacter pacificus
30 448024 448278 + NZ_CP053837.1 Aliarcobacter faecis
31 731168 731422 + NZ_CP054051.1 Aliarcobacter cibarius
32 1956185 1956439 - NZ_CP032098.1 Malaciobacter molluscorum LMG 25693
33 525874 526131 - NZ_CP041406.1 Sulfurimonas paralvinellae
34 465441 465695 + NZ_CP031367.1 Aliarcobacter trophiarum LMG 25534
35 2092471 2092725 - NZ_CP032100.1 Arcobacter suis CECT 7833
36 2086483 2086737 - NZ_CP041070.1 Arcobacter anaerophilus
37 2359874 2360128 - NZ_CP042652.1 Pseudoarcobacter acticola
38 668338 668589 - NC_014506.1 Sulfurimonas autotrophica DSM 16294
39 2248095 2248349 - NC_014166.1 Arcobacter nitrofigilis DSM 7299
40 1971964 1972218 - NZ_CP032101.1 Malaciobacter marinus
41 1983574 1983828 - NZ_CP019070.1 Poseidonibacter parvus
42 2493727 2493981 - NZ_CP053840.1 Arcobacter venerupis
43 1980735 1980989 - NZ_CP042812.1 Malaciobacter canalis
44 424349 424603 - NC_014762.1 Sulfuricurvum kujiense DSM 16994
45 1936644 1936898 - NZ_CP031218.1 Malaciobacter halophilus
46 219246 219497 - NC_013512.1 Sulfurospirillum deleyianum DSM 6946
47 2504286 2504537 + NZ_AP014724.1 Sulfurospirillum cavolei
48 537170 537424 + NZ_CP032823.1 Aliarcobacter cryaerophilus ATCC 43158
49 234127 234378 - NC_018002.1 Sulfurospirillum barnesii SES-3
50 2015503 2015757 - NZ_CP031219.1 Malaciobacter mytili LMG 24559
51 277264 277515 - NZ_CP017111.1 Sulfurospirillum halorespirans DSM 13726
52 298641 298892 - NZ_CP007201.1 Sulfurospirillum multivorans DSM 12446
53 463851 464105 + NZ_CP040463.1 Caminibacter mediatlanticus TB-2
54 177184 177441 + NC_012115.1 Nautilia profundicola AmH
55 1520102 1520356 - NZ_CP027432.2 Caminibacter pacificus
56 247889 248140 + NZ_CP010995.1 Campylobacter iguaniorum
57 1491990 1492241 - NZ_CP053828.1 Campylobacter hyointestinalis subsp. lawsonii
58 2681619 2681870 - NC_022357.1 Sulfuricella denitrificans skB26
59 3521230 3521481 + NZ_CP022358.1 Shewanella bicestrii
60 219298 219549 + NZ_CP059443.1 Campylobacter fetus
61 3884496 3884747 + NC_016901.1 Shewanella baltica OS678
62 608414 608668 + NZ_AP018738.1 Ferriphaselus amnicola
63 2162510 2162761 - NZ_CP029822.1 Entomomonas moraniae
64 3716767 3717018 + NZ_CP020472.1 Shewanella japonica
65 3536824 3537072 + NZ_AP022853.1 Sulfurimicrobium lacus
66 615579 615833 + NZ_AP014879.1 Sulfuricaulis limicola
67 546034 546285 + NZ_CP061081.1 Marinomonas arctica
68 3016893 3017144 + NZ_CP061081.1 Marinomonas arctica
69 145254 145499 - NZ_CP007770.1 Campylobacter insulaenigrae NCTC 12927
70 140407 140652 - NZ_CP007774.1 Campylobacter volucris LMG 24379
71 157849 158094 - NC_012039.1 Campylobacter lari RM2100
72 130493 130738 - NZ_CP053825.1 Campylobacter armoricus
73 159573 159818 - NZ_CP007773.1 Campylobacter subantarcticus LMG 24377
74 2392746 2393000 - NC_013959.1 Sideroxydans lithotrophicus ES-1
75 2770343 2770594 - NZ_CP072793.1 Thiothrix unzii
76 271598 271846 + NZ_CP019684.1 Campylobacter sputorum bv. paraureolyticus LMG 11764
77 802384 802629 - NZ_CP063079.1 Campylobacter peloridis
78 2565293 2565544 + NZ_AP018933.1 Zymobacter palmae
79 1126065 1126325 - NZ_CP037951.1 Parashewanella tropica
80 1949589 1949840 + NZ_CP041783.1 Shewanella donghaensis
81 167670 167915 - NZ_CP053848.1 Campylobacter ornithocola
82 1264082 1264333 + NZ_CP036200.1 Shewanella maritima
83 1887181 1887426 - NZ_CP012196.1 Campylobacter gracilis
84 3152323 3152571 - NZ_CP018099.1 Caldithrix abyssi DSM 13497
85 2207663 2207917 - NC_007484.1 Nitrosococcus oceani ATCC 19707
86 1135652 1135900 - NZ_AP022188.1 Aeromonas media
87 438745 438993 + NC_007969.1 Psychrobacter cryohalolentis K5
88 3632738 3632989 - NZ_CP054301.1 Marinomonas primoryensis
89 83712 83960 - NZ_CP015839.1 Marinobacterium aestuarii
90 2507682 2507933 + NZ_CP060820.1 Lysobacter solisilvae (ex Woo and Kim 2020)
91 1340677 1340928 - NZ_CP058952.1 Chitinibacter fontanus
92 405692 405940 + NC_007204.1 Psychrobacter arcticus 273-4
93 231270 231527 - NC_020888.1 Thalassolituus oleivorans MIL-1
94 254759 255010 + NZ_AP018725.1 Sulfuriflexus mobilis
95 1926761 1927009 + NZ_CP012678.1 Psychrobacter urativorans
96 791644 791892 + NZ_CP021781.1 Francisella adeliensis
97 708592 708846 + NZ_CP032091.1 Pseudoalteromonas donghaensis
98 1269782 1270036 + NC_017857.3 Methylophaga nitratireducenticrescens
99 4154397 4154648 - NZ_CP061941.1 Marinomonas algicola
100 869179 869433 + NZ_CP012373.2 Beggiatoa leptomitoformis
101 2284373 2284627 + NC_013960.1 Nitrosococcus halophilus Nc 4
102 1075712 1075960 - NZ_LR134376.1 Aeromonas encheleia
103 194828 195079 - NZ_AP018724.1 Sulfurivermis fontis
104 509366 509620 + NC_014394.1 Gallionella capsiferriformans ES-2
105 1645115 1645360 - NC_015696.1 Francisella salina
106 1056878 1057123 - NZ_CP043552.1 Francisella marina
107 3160064 3160321 - NZ_CP021359.1 Acidovorax carolinensis
108 2448020 2448271 + NZ_CP070273.1 Marinomonas foliarum
109 758720 758977 + NZ_CP070273.1 Marinomonas foliarum
110 803303 803551 + NZ_AP022345.1 Fluviibacter phosphoraccumulans
111 1349279 1349527 + NZ_CP046415.1 Guyparkeria halophila
112 471456 471707 - NZ_CP013124.1 Pseudomonas mendocina S5.2
113 4077007 4077258 - NC_015276.1 Marinomonas mediterranea MMB-1
114 3295591 3295848 + NC_009092.1 Shewanella loihica PV-4
115 1467036 1467281 - NZ_CP031611.1 Campylobacter hepaticus
116 302424 302672 - NZ_CP021435.1 Halomonas beimenensis
117 3469586 3469837 - NZ_AP012547.1 Sulfuritalea hydrogenivorans sk43H
118 380984 381247 + NZ_CP012418.1 Kangiella sediminilitoris
119 2225842 2226096 - NZ_AP012273.1 Thiolapillus brandeum
120 2798202 2798453 + NZ_CP012808.1 Acinetobacter equi
121 1610618 1610881 + NZ_CP012808.1 Acinetobacter equi
122 669282 669533 - NZ_CP029331.1 Thauera hydrothermalis
123 323805 324050 - NC_002163.1 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
124 3451598 3451849 + NZ_CP041036.1 Shewanella polaris
125 4841728 4841979 + NZ_CP068551.1 Pseudomonas khazarica
126 39836 40087 - NZ_LT906434.1 Neisseria zoodegmatis
127 1895318 1895572 - NC_014315.1 Nitrosococcus watsonii C-113
128 3698725 3698973 - NZ_CP017715.1 Marinobacter salinus
129 210484 210729 + NZ_CP011042.1 Pseudoalteromonas tetraodonis
130 1088289 1088543 - NZ_CP044483.1 Acinetobacter schindleri
131 850134 850397 + NZ_CP044483.1 Acinetobacter schindleri
132 497370 497618 + NZ_CP014945.1 Psychrobacter alimentarius
133 564892 565143 - NC_015942.1 Acidithiobacillus ferrivorans SS3
134 1258758 1259030 + NZ_CP035503.1 Rhodoferax sediminis
135 862552 862809 - NZ_CP016210.1 Azoarcus olearius
136 3104378 3104644 + NZ_CP064338.1 Schlegelella thermodepolymerans
137 581164 581418 - NZ_CP013187.1 Pseudoalteromonas phenolica
138 1224459 1224716 - NZ_CP022272.1 Shewanella marisflavi
139 1783162 1783431 + NZ_CP011451.1 Nitrosomonas communis
140 688269 688520 + NZ_AP018795.1 Acidithiobacillus ferridurans
141 1536189 1536437 - NZ_CP042382.1 Pistricoccus aurantiacus
142 238015 238269 + NZ_CP011029.1 Pseudoalteromonas espejiana DSM 9414
143 1726261 1726512 + NZ_CP070505.1 Pseudomonas toyotomiensis
144 3910448 3910696 + NC_019902.2 Thioalkalivibrio nitratireducens DSM 14787
145 954089 954337 + NZ_CP023559.1 Salinicola tamaricis
146 782591 782842 - NZ_CP060009.1 Pseudomonas sediminis
147 1998409 1998660 - NZ_LR134516.1 Neisseria animaloris
148 2596482 2596730 + NZ_CP031961.1 Pseudoalteromonas tunicata
149 712071 712340 - NZ_AP019755.1 Nitrosomonas stercoris
150 751013 751261 + NZ_CP041335.1 Chitinolyticbacter meiyuanensis
151 4064404 4064661 + NC_009831.1 Shewanella sediminis HAW-EB3
152 3374289 3374540 - NC_015559.1 Marinomonas posidonica IVIA-Po-181
153 939132 939383 - NC_018518.1 Bordetella pertussis 18323
154 691001 691255 - NZ_CP012505.1 Francisella persica ATCC VR-331
155 1821156 1821407 + NZ_CP012362.1 Oblitimonas alkaliphila
156 4034980 4035270 - NZ_CP017476.1 Hydrogenophaga crassostreae
157 1243395 1243646 - NZ_CP049801.1 Acinetobacter shaoyimingii
158 1087310 1087579 + NZ_CP049801.1 Acinetobacter shaoyimingii
159 353927 354187 + NZ_CP054626.1 Cupriavidus gilardii
160 2356687 2356938 + NZ_CP022684.1 Ketobacter alkanivorans
161 1629301 1629546 + NZ_CP020867.1 Campylobacter cuniculorum DSM 23162 = LMG 24588
162 1383635 1383880 + NZ_CP028339.1 Thauera aromatica K172
163 569332 569583 - NZ_CP028339.1 Thauera aromatica K172
164 678724 678972 - NZ_CP011039.1 Pseudoalteromonas spongiae UST010723-006
165 1878052 1878303 - NZ_CP019343.1 Oceanicoccus sagamiensis
166 660557 660805 - NC_017856.1 Methylophaga frappieri
167 589927 590178 - NZ_CP018839.1 Thauera chlorobenzoica
168 2326395 2326640 + NZ_CP018839.1 Thauera chlorobenzoica
169 500989 501261 + NZ_CP035708.1 Sphaerotilus natans subsp. sulfidivorans
170 1214144 1214395 - NC_008700.1 Shewanella amazonensis SB2B
171 622293 622544 - NZ_CP020373.1 Shewanella khirikhana
172 514790 515041 + NZ_CP072425.1 Pseudoalteromonas viridis
173 4759534 4759791 + NZ_CP014782.1 Shewanella psychrophila
174 3891073 3891324 - NZ_CP021455.1 Comamonas serinivorans
175 182827 183081 + NC_007482.1 Pseudoalteromonas translucida
176 2466965 2467234 - NC_008344.1 Nitrosomonas eutropha C91
177 4297992 4298261 + NZ_CP037952.1 Parashewanella spongiae
178 5557940 5558191 + NZ_CP068034.2 Pseudomonas syringae
179 230142 230393 - NZ_CP067022.1 Pseudomonas cannabina pv. alisalensis
180 5613599 5613850 + NZ_CP042804.1 Pseudomonas amygdali pv. tabaci str. ATCC 11528
181 346187 346438 - NZ_LR215729.2 Pseudomonas marincola
182 2504811 2505068 - NZ_CP017561.1 Paraburkholderia sprentiae WSM5005
183 1957045 1957296 - NZ_CP060414.1 Neisseria musculi
184 3970838 3971089 + NC_019940.1 Thioflavicoccus mobilis 8321
185 338243 338497 + NC_011901.1 Thioalkalivibrio sulfidiphilus HL-EbGr7
186 745047 745292 + NC_023029.1 Francisella orientalis LADL--07-285A
187 2141224 2141493 + NZ_CP071766.1 Acinetobacter towneri
188 1485685 1485933 + NZ_CP007142.1 Gynuella sunshinyii YC6258
189 1341650 1341901 + NZ_LR134533.1 Neisseria weaveri
190 462467 462718 - NC_004578.1 Pseudomonas syringae pv. tomato str. DC3000
191 2999218 2999469 + NZ_CP045571.1 Acidithiobacillus thiooxidans ATCC 19377
192 4286362 4286619 + NC_010506.1 Shewanella woodyi ATCC 51908
193 1727669 1727920 + NZ_AP018558.1 Hydrogenophilus thermoluteolus
194 3874661 3874915 + NC_011566.1 Shewanella piezotolerans WP3
195 370926 371192 + NZ_CP053069.1 Usitatibacter rugosus
196 2836931 2837182 - NZ_CP011367.1 Thioalkalivibrio versutus
197 641925 642179 - NZ_CP043420.1 Kushneria phosphatilytica
198 342310 342567 + NZ_LR699114.1 Aquicella lusitana
199 212762 213013 - NZ_CP014544.1 Zhongshania aliphaticivorans
200 2451328 2451579 + NC_011761.1 Acidithiobacillus ferrooxidans ATCC 23270
201 3716171 3716419 + NZ_CP007029.1 Thioalkalivibrio paradoxus ARh 1
202 1088429 1088680 - NZ_CP069213.1 Shewanella litorisediminis
203 308917 309174 + NZ_CP049134.1 Paraburkholderia tropica
204 390351 390602 + NZ_AP018721.1 Sulfuritortus calidifontis
205 1155131 1155376 - NZ_CP022375.1 Francisella opportunistica
206 588290 588550 + NZ_CP042941.1 Atlantibacter hermannii
207 1043318 1043569 + NZ_CP031699.1 Neisseria animalis
208 1130165 1130422 + NZ_LT906482.1 Eikenella corrodens
209 2873032 2873292 + NZ_CP016043.1 Edwardsiella hoshinae
210 483587 483847 + NZ_AP014936.1 Sulfurifustis variabilis
211 325812 326072 + NZ_CP032519.1 Cupriavidus oxalaticus
212 825532 825777 - NZ_CP040449.1 Aeromonas simiae
213 2278192 2278443 - NZ_CP059567.1 Neisseria shayeganii
214 135957 136202 + NZ_CP011158.1 Moraxella ovis
215 2997165 2997446 - NZ_CP019240.1 Rhodoferax antarcticus
216 819631 819885 + NC_006513.1 Aromatoleum aromaticum EbN1
217 1205663 1205917 + NZ_CP059467.1 Aromatoleum bremense
218 457454 457708 + NZ_CP048878.1 Spartinivicinus ruber
219 2563194 2563454 - NZ_AP018560.1 Aerosticca soli
220 383799 384059 + NZ_CP053073.1 Usitatibacter palustris
221 4057343 4057594 + NZ_CP043473.1 Chromobacterium paludis
222 157798 158043 - NZ_AP014545.1 Amphritea japonica ATCC BAA-1530
223 2358852 2359103 - NZ_CP039268.1 Thermochromatium tepidum ATCC 43061
224 2834139 2834429 - NZ_CP022423.1 Vitreoscilla filiformis
225 391586 391837 - NZ_CP007039.1 Pseudomonas cichorii JBC1
226 1418547 1418795 + NZ_CP072133.1 Pseudoalteromonas xiamenensis
227 317800 318060 + NZ_CP016022.1 Ralstonia insidiosa
228 240576 240821 + NZ_CP011031.1 Pseudoalteromonas issachenkonii
229 4533819 4534070 - NC_005085.1 Chromobacterium violaceum ATCC 12472
230 2627858 2628109 + NZ_CP014646.1 Thauera humireducens
231 3803144 3803395 - NZ_LR778301.1 Denitratisoma oestradiolicum
232 632704 632955 - NZ_CP020121.1 Comamonas kerstersii
233 593708 593953 + NZ_CP019628.1 Pseudoalteromonas aliena
234 5023895 5024155 + NZ_CP047650.1 Xylophilus rhododendri
235 3507273 3507521 + NC_014532.2 Halomonas elongata DSM 2581
236 1136676 1136921 - NC_017449.1 Francisella hispaniensis
237 193119 193364 + NZ_CP051183.1 Bermanella marisrubri
238 343641 343892 - NC_016043.1 Taylorella asinigenitalis MCE3
239 1042237 1042482 + NC_016112.1 Methylotuvimicrobium alcaliphilum 20Z
240 3697843 3698100 + NC_009901.1 Shewanella pealeana ATCC 700345
241 3788813 3789070 + NC_010334.1 Shewanella halifaxensis HAW-EB4
242 187462 187710 + NZ_CP011026.1 Pseudoalteromonas arctica A 37-1-2
243 782922 783182 - NZ_CP027669.1 Simplicispira suum
244 976305 976568 + NZ_CP032134.1 Acinetobacter chinensis
245 1233351 1233605 - NZ_CP018800.1 Mariprofundus ferrinatatus
246 1305778 1306023 - NZ_CP035467.1 Methylotuvimicrobium buryatense
247 535421 535672 + NZ_CP059564.1 Alysiella filiformis
248 3401669 3401923 - NZ_CP059560.1 Aromatoleum petrolei
249 484499 484753 + NZ_CP011797.1 Reinekea forsetii
250 4101063 4101311 + NZ_CP065435.1 Halomonas sp. SS10-MC5
251 210576 210821 - NZ_CP043869.1 Neptunomonas concharum
252 895870 896115 - NZ_CP053849.1 Campylobacter upsaliensis RM3940
253 1045645 1045890 - NZ_CP020478.1 Campylobacter helveticus
254 132388 132633 + NZ_CP011381.2 Moraxella bovoculi
255 347061 347324 + NZ_LR699119.1 Aquicella siphonis
256 2519398 2519670 - NC_014722.1 Mycetohabitans rhizoxinica HKI 454
257 828736 828990 + NZ_CP021377.1 Oceanisphaera profunda
258 386437 386697 + NZ_CP039287.1 Cupriavidus necator H16
259 2181073 2181321 - NZ_CP059082.1 Halomonas titanicae
260 232169 232420 + NZ_CP011037.1 Pseudoalteromonas nigrifaciens
261 1563067 1563315 - NZ_CP034015.1 Shewanella livingstonensis
262 293919 294170 - NZ_CP059565.1 Neisseria wadsworthii
263 181007 181258 - NZ_LR134313.1 Neisseria canis
264 2538084 2538341 + NZ_CP031467.1 Paraburkholderia caffeinilytica
265 1096020 1096298 + NZ_CP024645.1 Rhizobacter gummiphilus
266 2776896 2777147 + NZ_CP012621.1 Zobellella denitrificans
267 268448 268708 - NZ_CP064781.1 Azospira restricta
268 48614 48868 + NZ_CP033066.1 Pseudoalteromonas agarivorans
269 2189970 2190221 + NZ_CP029495.1 Chromobacterium phragmitis
270 3305509 3305763 - NZ_CP027666.1 Ottowia oryzae
271 3982115 3982366 - NZ_CP047241.1 Aquitalea denitrificans
272 1154502 1154756 + NZ_CP021358.1 Kushneria marisflavi
273 1552738 1552989 + NZ_CP039731.1 Aquitalea aquatilis
274 408081 408332 + NZ_AP019312.1 Chromobacterium haemolyticum
275 846886 847146 + NZ_CP023706.1 Edwardsiella tarda
276 947794 948063 + NC_008781.1 Polaromonas naphthalenivorans CJ2
277 719927 720172 + NZ_CP058907.1 Rhodopseudomonas palustris
278 1482176 1482427 + NZ_CP041730.1 Chitinimonas arctica
279 4128818 4129066 + NZ_CP013106.1 Halomonas huangheensis
280 3282987 3283256 - NZ_CP020737.1 Paraburkholderia acidophila
281 3521805 3522056 + NZ_CP046378.1 Shewanella algae
282 550536 550793 + NC_023018.2 Pandoraea pnomenusa
283 313019 313279 + NZ_CP046909.1 Paraburkholderia acidiphila
284 2051029 2051283 - NZ_CP021323.1 Kushneria konosiri
285 4022613 4022876 + NZ_CP019038.1 Massilia putida
286 1733947 1734201 + NZ_CP038033.1 Nitrosococcus wardiae
287 706521 706778 + NZ_CP007030.1 Thiomicrospira aerophila AL3
288 1813854 1814105 - NZ_CP039887.1 Neisseria subflava
289 1929561 1929812 + NZ_CP039886.1 Neisseria flavescens
290 4181573 4181821 + NZ_CP043042.1 Marinobacter fonticola
291 3871683 3871943 - NZ_CP014136.1 Gibbsiella quercinecans
292 727976 728224 - NZ_CP068285.1 Ralstonia syzygii subsp. celebesensis
293 1272181 1272435 - NZ_CP035934.2 Acinetobacter cumulans
294 1020598 1020861 + NZ_CP035934.2 Acinetobacter cumulans
295 1437921 1438169 - NZ_CP024632.1 Acinetobacter junii
296 863570 863833 + NZ_CP024632.1 Acinetobacter junii
297 820969 821229 + NZ_CP017754.1 Cupriavidus malaysiensis
298 1053220 1053489 - NC_004757.1 Nitrosomonas europaea ATCC 19718
299 1146043 1146297 + NZ_CP018799.1 Mariprofundus aestuarium
300 1078947 1079195 + NZ_CP041242.1 Lysobacter alkalisoli
301 305134 305391 + NZ_CP029640.1 Paraburkholderia dokdonella
302 318585 318845 + NZ_CP046913.1 Paraburkholderia acidisoli
303 3319657 3319923 - NZ_CP013459.1 Burkholderia stagnalis
304 1412159 1412407 - NZ_CP009888.1 Pseudoalteromonas piratica
305 739787 740047 - NZ_CP013341.1 Nitrosomonas ureae
306 19783 20034 - NZ_CP007031.1 Marichromatium purpuratum 984
307 1010823 1011080 - NC_007645.1 Hahella chejuensis KCTC 2396
308 2317822 2318073 + NZ_CP072524.1 Neisseria sicca
309 524344 524607 + NC_007651.1 Burkholderia thailandensis E264
310 2424551 2424811 - NC_013166.1 Kangiella koreensis DSM 16069
311 2577322 2577582 - NZ_CP006664.1 Edwardsiella anguillarum ET080813
312 360188 360445 + NC_007951.1 Paraburkholderia xenovorans LB400
313 3274444 3274692 + NC_007963.1 Chromohalobacter salexigens DSM 3043
314 601269 601526 + NZ_CP010310.2 Pandoraea pulmonicola
315 1047430 1047681 - NZ_CP022278.1 Neisseria chenwenguii
316 3546659 3546910 + NZ_CP017707.1 Chromobacterium vaccinii
317 2586672 2586929 + NZ_CP028271.1 Mixta intestinalis
318 2010022 2010270 + NZ_CP011129.1 Lysobacter antibioticus
319 3375983 3376231 + NZ_CP014226.1 Halomonas chromatireducens
320 1793846 1794100 + NZ_CP045650.1 Acinetobacter wanghuae
321 1998527 1998790 - NZ_CP045650.1 Acinetobacter wanghuae
322 1191660 1191926 - NZ_CP008781.1 Burkholderia pseudomallei
323 4450432 4450692 + NZ_CP018845.1 Herbaspirillum robiniae
324 1287336 1287587 - NZ_CP065820.1 Acinetobacter seifertii
325 3222986 3223249 - NZ_CP065820.1 Acinetobacter seifertii
326 1336862 1337110 + NZ_CP018139.1 Halomonas aestuarii
327 481977 482228 - NZ_CP011835.1 Azotobacter chroococcum
328 2466401 2466652 + NZ_CP051180.1 Ferrimonas lipolytica
329 602353 602604 - NZ_CP027524.1 Pseudoalteromonas carrageenovora
330 2233170 2233430 - NZ_CP025120.1 Kangiella profundi
331 209834 210100 - NZ_CP009727.1 Burkholderia mallei
332 379098 379361 + NZ_CP010975.1 Kangiella geojedonensis
333 326322 326570 + NZ_CP010554.1 Rugosibacter aromaticivorans
334 585055 585312 + NZ_CP047385.1 Pandoraea fibrosis
335 236523 236780 + NC_021287.1 Caballeronia insecticola
336 497278 497538 + NZ_CP062803.1 Cupriavidus basilensis
337 1199365 1199628 - NZ_CP009555.1 Burkholderia oklahomensis C6786
338 774450 774707 - NZ_CP022989.1 Paraburkholderia aromaticivorans
339 1897401 1897670 - NZ_CP035900.1 Burkholderia glumae
340 3281304 3281555 - NC_018012.1 Thiocystis violascens DSM 198
341 4543983 4544228 - NC_015572.1 Methylomonas methanica MC09
342 2302457 2302708 + NZ_CP019448.1 Simonsiella muelleri ATCC 29453
343 6088 6351 - NZ_CP035936.1 Acinetobacter cumulans
344 411815 412072 + NZ_CP024934.1 Paraburkholderia graminis
345 374908 375165 + NZ_CP024941.1 Paraburkholderia terricola
346 1373078 1373344 - NZ_LT615228.1 Polynucleobacter necessarius
347 3950288 3950548 - NZ_CP011568.3 Pandoraea thiooxydans
348 3182588 3182839 - NZ_CP045302.1 Azotobacter salinestris
349 560165 560431 + NZ_CP031124.1 Ephemeroptericola cinctiostellae
350 868661 868921 - NC_012779.2 Edwardsiella ictaluri 93-146
351 3772907 3773164 + NZ_CP046904.1 Massilia flava
352 1005231 1005485 - NZ_CP025682.1 Azoarcus pumilus
353 5210729 5210977 + NZ_CP021425.1 Oleiphilus messinensis
354 4942775 4943032 - NZ_CP013481.2 Pandoraea apista
355 3351178 3351426 + NZ_AP022843.1 Halomonas hydrothermalis
356 3594263 3594511 + NZ_CP065135.1 Halomonas venusta
357 1194911 1195168 - NC_007954.1 Shewanella denitrificans OS217
358 4859077 4859328 - NZ_CP013729.1 Roseateles depolymerans
359 1167261 1167509 + NC_016147.2 Pseudoxanthomonas spadix BD-a59
360 1272520 1272771 - NZ_CP053391.1 Acinetobacter lactucae
361 3092296 3092559 - NZ_CP053391.1 Acinetobacter lactucae
362 20024 20281 + NZ_CP038018.1 Eikenella exigua
363 1705186 1705434 - NZ_CP048812.1 Halomonas socia
364 2407274 2407558 - NZ_CP029210.1 Aquabacterium olei
365 1798490 1798759 + NZ_CP012371.1 Nitrosospira briensis C-128
366 3032712 3032981 + NZ_LT671418.1 Herminiimonas arsenitoxidans
367 1751005 1751256 - NZ_CP021520.1 Neisseria meningitidis
368 1028490 1028741 + NZ_CP012028.1 Neisseria gonorrhoeae
369 1935966 1936217 - NZ_CP031253.1 Neisseria lactamica
370 1794792 1795061 - NC_007908.1 Rhodoferax ferrireducens T118
371 358411 358662 - NZ_CP021060.1 Taylorella equigenitalis
372 1796908 1797153 + NZ_CP043929.1 Methylomonas rhizoryzae
373 637600 637878 + NZ_CP013236.1 Collimonas pratensis
374 780887 781150 + NZ_CP029397.2 Acinetobacter defluvii
375 325418 325669 - NZ_CP059563.1 Conchiformibius steedae
376 1021043 1021294 - NC_014541.1 Ferrimonas balearica DSM 9799
377 3878097 3878360 - NZ_LS483250.1 Moritella yayanosii
378 178665 178916 + NZ_CP048833.1 Pseudomonas multiresinivorans
379 3264038 3264289 - NC_013851.1 Allochromatium vinosum DSM 180
380 3798974 3799243 - NZ_CP002580.1 Burkholderia plantarii
381 3163639 3163887 + NZ_CP048602.1 Halomonas piezotolerans
382 2270693 2270944 - NC_014207.1 Methylotenera versatilis 301
383 2330378 2330632 + NZ_CP009977.1 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
384 79468 79731 - NZ_CP044399.1 Moritella marina ATCC 15381
385 1134686 1134952 + NZ_CP016895.1 Acinetobacter larvae
386 898051 898323 + NZ_CP013232.1 Collimonas fungivorans
387 2247233 2247490 - NZ_CP066075.1 Paraburkholderia ginsengisoli
388 632646 632903 + NC_010681.1 Paraburkholderia phytofirmans PsJN
389 4492173 4492469 - NZ_CP019236.1 Rhodoferax koreense
390 1671473 1671724 + NZ_LS483369.1 Neisseria cinerea
391 961533 961784 - NZ_CP031325.1 Neisseria polysaccharea
392 1240666 1240917 + NZ_CP046027.1 Neisseria brasiliensis
393 426899 427153 - NZ_CP042218.1 Luteimonas granuli
394 917729 917992 + NZ_CP020046.1 Thiomonas intermedia
395 5875631 5875882 + NC_021505.1 Pseudomonas putida NBRC 14164
396 414052 414336 + NZ_CP053627.1 Xylella taiwanensis
397 116585 116836 + NZ_CP013816.1 Piscirickettsia salmonis
398 3028116 3028376 + NZ_LR134531.1 Pragia fontium
399 1652087 1652344 - NZ_CP015958.1 Paraburkholderia caribensis
400 616707 616964 + NZ_CP010897.2 Pandoraea vervacti
401 3139364 3139624 - NC_007614.1 Nitrosospira multiformis ATCC 25196
402 3502451 3502720 - NZ_CP013414.1 Burkholderia ubonensis
403 1010769 1011029 - NZ_CP042220.2 Dickeya poaceiphila
404 445979 446236 + NZ_CP022579.1 Oryzomicrobium terrae
405 2403619 2403870 + NZ_CP059569.1 Kingella oralis
406 4027886 4028152 + NZ_CP041352.1 Casimicrobium huifangae
407 3964216 3964476 + NC_005126.1 Photorhabdus laumondii subsp. laumondii TTO1
408 2447244 2447492 + NZ_CP012943.1 Ralstonia solanacearum
409 1917370 1917633 + NC_016603.1 Acinetobacter pittii PHEA-2
410 117693 117956 + NC_016603.1 Acinetobacter pittii PHEA-2
411 374984 375247 + NZ_CP023422.1 Janthinobacterium svalbardensis
412 326764 327015 - NC_012560.1 Azotobacter vinelandii DJ
413 346638 346904 + NZ_CP048832.1 Janthinobacterium lividum
414 1914593 1914844 - NC_012968.1 Methylotenera mobilis JLW8
415 1202561 1202824 - NZ_CP040105.1 Acinetobacter nosocomialis M2
416 353788 354045 + NC_010622.1 Paraburkholderia phymatum STM815
417 5603476 5603727 + NZ_CP022562.1 Pseudomonas monteilii
418 476927 477190 + NC_002977.6 Methylococcus capsulatus str. Bath
419 1059117 1059371 - NZ_CP043146.1 Bordetella holmesii
420 4738355 4738615 - NZ_CP011930.1 Herbaspirillum seropedicae
421 1473119 1473382 - NZ_CP030086.1 Polynucleobacter paneuropaeus
422 456271 456522 + NZ_CP059571.1 Neisseria bacilliformis
423 6919454 6919711 - NZ_CP036401.1 Massilia albidiflava
424 542185 542463 + NZ_CP013235.1 Collimonas arenae
425 691449 691703 - NZ_CP009354.1 Vibrio tubiashii ATCC 19109
426 315534 315797 + NC_017033.1 Frateuria aurantia DSM 6220
427 4303812 4304063 - NZ_CP005960.1 Pseudomonas mandelii JR-1
428 3168890 3169156 - NZ_CP013401.1 Burkholderia metallica
429 3279996 3280262 - NC_007510.1 Burkholderia lata
430 4798424 4798684 - NZ_CP037993.1 Herbaspirillum huttiense
431 338851 339108 + NZ_CP026111.1 Paraburkholderia terrae
432 1294605 1294853 + NZ_CP029843.1 Lysobacter maris
433 67971 68225 - NZ_CP021376.1 Oceanisphaera avium
434 2956466 2956714 - NZ_CP051461.1 Polaromonas vacuolata
435 4251099 4251365 + NZ_CP041185.1 Janthinobacterium tructae
436 324371 324637 + NZ_CP009795.1 Burkholderia dolosa AU0158
437 3119008 3119274 - NZ_CP013398.1 Burkholderia seminalis
438 875233 875499 - NZ_CP011503.1 Burkholderia pyrrocinia
439 3182338 3182604 - NZ_CP013450.1 Burkholderia cenocepacia
440 3261296 3261562 - NZ_CP045235.1 Burkholderia cepacia
441 260852 261103 - NZ_CP043311.1 Pseudomonas lalkuanensis
442 1510213 1510470 - NZ_AP021888.1 Thiosulfativibrio zosterae
443 643360 643617 + NZ_CP013480.3 Pandoraea norimbergensis
444 3123530 3123793 - NZ_CP009832.1 Burkholderia multivorans ATCC BAA-247
445 1798932 1799213 + NZ_CP037883.1 Stenotrophomonas indicatrix
446 722762 723016 - NZ_CP044069.1 Vibrio vulnificus
447 227349 227600 - NZ_AP019378.1 Bordetella parapertussis
448 4162955 4163206 + NZ_LR134326.1 Bordetella bronchiseptica
449 3176735 3176986 + NZ_CP014262.1 Pseudomonas corrugata
450 6369178 6369429 + NZ_CP034725.1 Pseudomonas brassicacearum
451 891810 892082 + NZ_CP019239.1 Rhodoferax saidenbachensis
452 3790558 3790812 + NC_014306.1 Erwinia billingiae Eb661
453 5007806 5008063 + NZ_CP040017.1 Massilia umbonata
454 1403509 1403766 - NZ_AP020335.1 Hydrogenovibrio marinus
455 1216256 1216519 - NC_014259.1 Acinetobacter oleivorans DR1
456 3293125 3293388 - NC_014259.1 Acinetobacter oleivorans DR1
457 2262927 2263187 + NZ_CP011257.1 Ralstonia mannitolilytica
458 3581156 3581404 + NZ_CP031093.1 Hydrocarboniclastica marina
459 4588159 4588410 - NZ_CP048810.1 Pseudomonas bijieensis
460 642310 642564 - NZ_CP045350.1 Vibrio aquimaris
461 2213640 2213885 - NZ_CP011412.1 Sedimenticola thiotaurini
462 3874216 3874470 + NZ_CP016440.1 Bordetella pseudohinzii
463 460495 460746 - NZ_CP047698.1 Pseudomonas knackmussii
464 553187 553438 - NZ_CP014158.1 Pseudomonas citronellolis
465 6312769 6313020 + NZ_CP035088.1 Pseudomonas viciae
466 460845 461099 - NZ_CP016414.1 Vibrio scophthalmi
467 682219 682476 - NZ_CP047475.1 Vibrio astriarenae
468 786351 786596 + NZ_CP016796.1 Francisella uliginis
469 3316838 3317089 + NZ_CP009533.1 Pseudomonas rhizosphaerae
470 1228887 1229150 + NZ_CP018632.1 Granulosicoccus antarcticus IMCC3135
471 1287802 1288047 + NZ_CP034759.1 Litorilituus sediminis
472 248444 248695 - NZ_AP014862.1 Pseudomonas furukawaii
473 918730 918984 + NZ_CP021395.1 Bordetella hinzii
474 3250900 3251160 + NC_012880.1 Musicola paradisiaca Ech703
475 412582 412857 + NZ_CP024608.1 Massilia violaceinigra
476 406247 406498 - NC_002516.2 Pseudomonas aeruginosa PAO1
477 3369250 3369504 + NZ_CP017415.1 Acidihalobacter yilgarnenesis
478 769236 769493 + NC_007947.1 Methylobacillus flagellatus KT
479 3678894 3679142 - NZ_CP060731.1 Pseudoxanthomonas mexicana
480 3347817 3348068 + NZ_CP031146.1 Pseudomonas plecoglossicida
481 1469834 1470085 + NZ_LR134302.1 Achromobacter spanius
482 1138716 1138961 - NZ_CP038241.1 Allofrancisella inopinata
483 2955143 2955400 - NZ_CP017689.1 Thalassotalea crassostreae
484 1850755 1851039 + NZ_CP012900.1 Stenotrophomonas acidaminiphila
485 2162950 2163213 - NZ_CP041970.1 Acinetobacter dispersus
486 350773 351024 - NZ_AP022642.1 Pseudomonas otitidis
487 1846947 1847204 - NZ_CP023276.1 Polynucleobacter difficilis
488 302828 303082 + NZ_AP021884.1 Sulfuriferula plumbiphila
489 3494103 3494357 + NZ_CP005974.1 Photobacterium gaetbulicola Gung47
490 2325652 2325906 + NZ_AP019651.1 Vibrio taketomensis
491 560748 560993 + NZ_CP038017.1 Allofrancisella frigidaquae
492 598115 598369 - NC_011753.2 Vibrio atlanticus
493 2674065 2674319 + NZ_CP039700.1 Vibrio cyclitrophicus
494 1024769 1025020 - NZ_CP038034.1 Achromobacter insolitus
495 4782944 4783204 - NZ_CP013737.1 Herbaspirillum rubrisubalbicans M1
496 6422327 6422578 + NZ_CP061079.1 Pseudomonas chlororaphis
497 5769270 5769521 + NZ_CP010896.1 Pseudomonas simiae
498 1512565 1512816 - NZ_CP031252.1 Neisseria elongata
499 2640926 2641180 + NC_011312.1 Aliivibrio salmonicida LFI1238
500 415574 415831 + NZ_CP028324.1 Massilia armeniaca
501 2222974 2223267 - NZ_CP046570.1 Xanthomonas albilineans
502 3977277 3977528 + NZ_CP053986.1 Achromobacter denitrificans
503 807470 807724 + NZ_CP065150.1 Vibrio kanaloae
504 2204954 2205208 - NC_017094.1 Leptospirillum ferrooxidans C2-3
505 2319629 2319886 - NZ_CP016278.1 Diaphorobacter polyhydroxybutyrativorans
506 738686 738937 + NZ_LR134343.1 Moraxella cuniculi
507 5729696 5729947 + NZ_CP023272.1 Pseudomonas lurida
508 1668602 1668847 - NZ_CP014476.1 Methylomonas denitrificans
509 2822702 2822956 + NZ_CP037953.1 Permianibacter aggregans
510 6468469 6468720 + NZ_LS999205.1 Pseudomonas protegens CHA0
511 2594202 2594465 - NZ_CP030880.1 Acinetobacter haemolyticus
512 6145986 6146237 + NZ_CP027756.1 Pseudomonas synxantha
513 3112963 3113226 - NZ_CP015121.1 Acinetobacter baumannii
514 1252110 1252373 - NZ_CP015121.1 Acinetobacter baumannii
515 5487101 5487352 + NZ_CP046621.1 Pseudomonas alkylphenolica
516 410369 410620 - NZ_CP071706.1 Pseudomonas donghuensis
517 509278 509529 - NZ_CP070503.1 Pseudomonas atacamensis
518 5938951 5939202 + NZ_CP029608.1 Pseudomonas kribbensis
519 2765903 2766154 - NZ_CP014205.2 Pseudomonas glycinae
520 6157008 6157259 + NZ_CP062253.1 Pseudomonas gozinkensis
521 6156768 6157019 + NZ_CP062252.1 Pseudomonas allokribbensis
522 6506000 6506251 + NZ_CP051487.1 Pseudomonas umsongensis
523 6445950 6446201 + NZ_CP014870.1 Pseudomonas silesiensis
524 2001646 2001912 - NC_009379.1 Polynucleobacter asymbioticus QLW-P1DMWA-1
525 1897625 1897873 + NZ_CP023465.1 Lysobacter capsici
526 1882272 1882538 - NZ_CP007501.1 Polynucleobacter duraquae
527 586915 587169 - NC_010645.1 Bordetella avium 197N
528 5546906 5547157 + NZ_CP027723.1 Pseudomonas orientalis
529 5393955 5394206 + NZ_CP024159.1 Pseudomonas mosselii
530 303661 303912 - NC_008027.1 Pseudomonas entomophila L48
531 4569603 4569854 + NZ_CP009365.1 Pseudomonas soli
532 309404 309655 - NZ_CP062158.2 Pseudomonas lundensis
533 4189685 4189936 + NC_010170.1 Bordetella petrii
534 282439 282696 + NC_008576.1 Magnetococcus marinus MC-1
535 3016288 3016533 - NZ_AP021881.1 Sulfuriferula nivalis
536 935314 935592 + NZ_CP027860.1 Ahniella affigens
537 2759823 2760077 + NZ_CP071325.1 Photobacterium ganghwense
538 5680853 5681110 - NZ_HG322949.1 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628
539 6059265 6059516 + NZ_CP056030.1 Pseudomonas eucalypticola
540 1063495 1063758 - NZ_CP070518.1 Acinetobacter calcoaceticus
541 755374 755625 + NZ_CP031700.1 Neisseria zalophi
542 2641705 2641959 + NZ_LT960611.1 Vibrio tapetis subsp. tapetis
543 6476204 6476455 + NZ_CP018420.1 Pseudomonas veronii
544 3677976 3678227 + NZ_CP003915.1 Advenella mimigardefordensis DPN7
545 1685205 1685456 - NC_014147.1 Moraxella catarrhalis BBH18
546 294812 295066 + NZ_CP007446.1 Snodgrassella alvi wkB2
547 1537144 1537401 - NZ_CP035033.1 Hydrogenovibrio thermophilus
548 1249501 1249761 - NZ_LR134373.1 Yersinia pseudotuberculosis
549 363084 363332 + NZ_CP030241.1 Moraxella bovis
550 656821 657072 - NZ_CP016172.1 Bordetella flabilis
551 2889822 2890070 + NZ_LN907827.1 Erwinia gerundensis
552 2665418 2665672 + NZ_CP028901.1 Algicoccus marinus
553 2780855 2781109 + NZ_CP070624.1 Photobacterium damselae subsp. damselae
554 530558 530803 - NC_011026.1 Chloroherpeton thalassium ATCC 35110
555 258031 258276 + NC_002971.4 Coxiella burnetii RSA 493
556 641306 641557 - NZ_CP016171.1 Bordetella bronchialis
557 516579 516827 + NZ_CP065728.1 Moraxella nonliquefaciens
558 957654 957908 + NZ_CP031222.1 Aquirhabdus parva
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Neighborhood Conservation Analysis
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Conservation Analysis
Neighborhood Representative Chosen(Species): NC_022357.1
Sr.No. Domain Co-occurrence Frequency No. of species in which domain occurs with smORF Median distance b/w smORF and domain bearing ORFs Orientation relative to smORF PFAM Information
1 PF01467.28 0.6 327 60.0 same-strand Cytidylyltransferase-like
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