Result : EXP01577
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP01577 |
| NCBI Accession ID | NC_007633.1 |
| Organism | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
| Left | 773451 |
| Right | 773672 |
| Strand | - |
| Nucleotide Sequence | ATGACTATTTATAATCAAATTATTAAAGAGTTAAAAAGCAGAGGCGCTAAAGGTAATCTTACTAAAGATAGTGAATTTAAATCTCTAGGCTTAGATTCTTTAGATTTAATGGATATGGTAGTTACATTAGAAGAAAAACTAGATATTAGAATTAGTGATGATCAACTACTAAGTTTGCGTACTATTGATGATTTGTTAAAAGTAATAGAGGAATTAAAATAA |
| Sequence | MTIYNQIIKELKSRGAKGNLTKDSEFKSLGLDSLDLMDMVVTLEEKLDIRISDDQLLSLRTIDDLLKVIEELK |
| Source of smORF | Protein-level |
| Function | The ORF matches to the profile of cl09936. Profile Description: Phosphopantetheine attachment site. acyl carrier protein; Provisional |
| Pubmed ID | 30796087 |
| Domain | CDD:415812 |
| Functional Category | Conserved domain based functional assignment |
| Uniprot ID | |
| ORF Length (Amino Acid) | 73 |
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| Conservation Analysis |
No. of Species: 34
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 773451 | 773672 | - | NC_007633.1 | Mycoplasma capricolum subsp. capricolum ATCC 27343 |
| 2 | 770745 | 770966 | - | NZ_CP001668.1 | Mycoplasma mycoides subsp. capri str. GM12 |
| 3 | 191405 | 191629 | + | NZ_LS991954.1 | Mycoplasma putrefaciens |
| 4 | 760284 | 760508 | - | NZ_CP007520.1 | Mycoplasma yeatsii GM274B |
| 5 | 995210 | 995434 | - | NZ_CP006681.1 | Spiroplasma culicicola AES-1 |
| 6 | 198017 | 198241 | + | NZ_CP025257.1 | Mesoplasma syrphidae |
| 7 | 304683 | 304916 | + | NZ_CP024870.1 | Spiroplasma clarkii |
| 8 | 931056 | 931283 | - | NZ_CP017015.1 | Spiroplasma helicoides |
| 9 | 692415 | 692639 | - | NC_006055.1 | Mesoplasma florum L1 |
| 10 | 733694 | 733918 | - | NZ_CP024964.1 | Entomoplasma melaleucae |
| 11 | 732607 | 732831 | - | NZ_CP023173.1 | Mesoplasma chauliocola |
| 12 | 737792 | 738016 | - | NZ_CP024969.1 | Mesoplasma tabanidae |
| 13 | 749543 | 749767 | - | NZ_CP024411.1 | Mesoplasma entomophilum |
| 14 | 399422 | 399649 | + | NZ_CP024963.1 | Entomoplasma luminosum |
| 15 | 1019282 | 1019509 | - | NZ_CP038013.1 | Spiroplasma gladiatoris |
| 16 | 202777 | 203001 | + | NZ_CP024965.1 | Entomoplasma somnilux |
| 17 | 1039865 | 1040089 | - | NC_022998.1 | Spiroplasma apis B31 |
| 18 | 810106 | 810330 | - | NC_021833.1 | Spiroplasma diminutum CUAS-1 |
| 19 | 1126033 | 1126260 | - | NZ_CP046276.1 | Spiroplasma tabanidicola |
| 20 | 1032454 | 1032678 | - | NZ_CP012622.1 | Spiroplasma cantharicola |
| 21 | 1093087 | 1093311 | - | NZ_CP025057.1 | Spiroplasma floricola 23-6 |
| 22 | 779581 | 779805 | - | NZ_CP025543.1 | Spiroplasma monobiae MQ-1 |
| 23 | 701713 | 701937 | + | NZ_CP024962.1 | Entomoplasma freundtii |
| 24 | 158645 | 158875 | + | NZ_CP012357.1 | Spiroplasma litorale |
| 25 | 957232 | 957456 | - | NC_021846.1 | Spiroplasma taiwanense CT-1 |
| 26 | 159132 | 159359 | + | NZ_CP022535.1 | Spiroplasma corruscae |
| 27 | 807002 | 807226 | - | NZ_CP006934.1 | Spiroplasma sabaudiense Ar-1343 |
| 28 | 160322 | 160552 | + | NZ_CP012328.1 | Spiroplasma turonicum |
| 29 | 1185659 | 1185883 | - | NZ_CP043026.1 | Spiroplasma chinense |
| 30 | 837905 | 838129 | - | NZ_CP031376.1 | Spiroplasma alleghenense |
| 31 | 519744 | 519968 | - | NZ_CP023668.1 | Mesoplasma lactucae ATCC 49193 |
| 32 | 1200311 | 1200535 | - | NZ_CP011856.1 | Spiroplasma eriocheiris |
| 33 | 986113 | 986337 | - | NZ_CP002082.1 | Spiroplasma mirum ATCC 29335 |
| 34 | 1014003 | 1014227 | - | NZ_CP011855.1 | Spiroplasma atrichopogonis |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_007633.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01475.21 | 0.71 | 24 | 2.0 | same-strand | Ferric uptake regulator family |
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