Result : EXP01523
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP01523 |
| NCBI Accession ID | NZ_CP009472.1 |
| Organism | Lactococcus lactis strain AI06 |
| Left | 1409806 |
| Right | 1410048 |
| Strand | - |
| Nucleotide Sequence | ATGGCAATTACAAATGAACAAGTAGAACGCATTAATGAATTAGCGCGTAAGAAAAAAGCAGAAGGATTATCAGAAGCTGAACTTGAAGAACAAGCCCTTTTACGTCGTGCTTACCTCGATAGTGTTAAAGCAAATTTCCGCTCACAAGTTGAAACCATCAAAGTTATTGATGAAAAAACAGGAGAAGATGTTACTCCGGATAAACTTAAAGAAATTCAACGTAAGAATGGGATGCGCGACTGA |
| Sequence | MAITNEQVERINELARKKKAEGLSEAELEEQALLRRAYLDSVKANFRSQVETIKVIDEKTGEDVTPDKLKEIQRKNGMRD |
| Source of smORF | Protein-level |
| Function | cytoplasm [GO:0005737] The ORF matches to the profile of cl01722. Profile Description: Bacterial protein of unknown function (DUF896). hypothetical protein; Provisional |
| Pubmed ID | 30796087 |
| Domain | CDD:413030 |
| Functional Category | Gene Ontology/Expression based functional assignment |
| Uniprot ID | Q9CGJ9 |
| ORF Length (Amino Acid) | 80 |
++ More..
| Conservation Analysis |
No. of Species: 103
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1065899 | 1066141 | + | NC_022369.1 | Lactococcus lactis subsp. cremoris KW2 |
| 2 | 1089010 | 1089252 | + | NZ_CP070872.1 | Lactococcus taiwanensis |
| 3 | 751589 | 751831 | + | NZ_CP032627.1 | Lactococcus allomyrinae |
| 4 | 1515385 | 1515624 | - | NZ_CP065637.1 | Lactococcus garvieae |
| 5 | 1219267 | 1219518 | + | NZ_CP018061.1 | Enterococcus mundtii |
| 6 | 1860034 | 1860276 | + | NZ_CP023392.1 | Lactococcus raffinolactis |
| 7 | 859919 | 860161 | - | NZ_CP026116.1 | Latilactobacillus curvatus JCM 1096 = DSM 20019 |
| 8 | 839398 | 839634 | + | NZ_CP068061.1 | Mammaliicoccus vitulinus |
| 9 | 1546355 | 1546594 | - | NZ_CP023074.1 | Enterococcus thailandicus |
| 10 | 1377374 | 1377613 | + | NZ_LR134304.1 | Staphylococcus schweitzeri |
| 11 | 1129822 | 1130058 | + | NC_014925.1 | Staphylococcus pseudintermedius HKU10-03 |
| 12 | 2346422 | 2346658 | + | NZ_CP020773.1 | Staphylococcus lutrae |
| 13 | 1676280 | 1676531 | + | NC_020207.1 | Enterococcus faecium ATCC 8459 = NRRL B-2354 |
| 14 | 1970186 | 1970443 | - | NZ_CP031733.1 | Streptococcus chenjunshii |
| 15 | 1662950 | 1663147 | - | NC_012924.1 | Streptococcus suis SC84 |
| 16 | 1816353 | 1816589 | + | NZ_CP027770.1 | Staphylococcus felis |
| 17 | 1568580 | 1568816 | - | NZ_CP008747.1 | Staphylococcus hyicus |
| 18 | 1341658 | 1341909 | + | NZ_CP065211.1 | Enterococcus lactis |
| 19 | 1141462 | 1141701 | + | NZ_LS483306.1 | Enterococcus cecorum |
| 20 | 702936 | 703178 | + | NZ_CP045007.1 | Latilactobacillus graminis |
| 21 | 988159 | 988395 | + | NZ_CP045927.1 | Staphylococcus agnetis |
| 22 | 2206410 | 2206649 | - | NZ_CP033732.1 | Staphylococcus hominis |
| 23 | 1312835 | 1313074 | + | NZ_LT906460.1 | Staphylococcus simiae |
| 24 | 1324143 | 1324379 | - | NZ_CP022046.2 | Mammaliicoccus sciuri |
| 25 | 1811297 | 1811536 | - | NC_020995.1 | Enterococcus casseliflavus EC20 |
| 26 | 291914 | 292171 | + | NZ_CP014699.1 | Streptococcus pantholopis |
| 27 | 2531009 | 2531293 | - | NZ_CP018796.1 | Lentilactobacillus parabuchneri |
| 28 | 1299218 | 1299454 | - | NZ_LT906464.1 | Staphylococcus muscae |
| 29 | 127964 | 128206 | - | NZ_CP046037.1 | Latilactobacillus sakei |
| 30 | 577685 | 577939 | + | NZ_CP011403.1 | Ligilactobacillus salivarius str. Ren |
| 31 | 1786349 | 1786603 | - | NZ_LT906439.1 | Streptococcus merionis |
| 32 | 1231947 | 1232147 | + | NZ_CP054482.1 | Macrococcus bohemicus |
| 33 | 1821405 | 1821656 | + | NZ_CP053988.1 | Abiotrophia defectiva |
| 34 | 1002552 | 1002785 | + | NZ_CP013911.1 | Staphylococcus haemolyticus |
| 35 | 446054 | 446290 | - | NZ_CP014022.1 | Staphylococcus lugdunensis |
| 36 | 1935876 | 1936079 | + | NZ_CP029971.1 | Lentilactobacillus kefiri |
| 37 | 274016 | 274213 | - | NZ_CP015196.1 | Streptococcus marmotae |
| 38 | 767338 | 767589 | - | NZ_CP045562.1 | Fructilactobacillus fructivorans |
| 39 | 1330412 | 1330654 | - | NZ_CP017195.1 | Lactococcus paracarnosus |
| 40 | 1409501 | 1409737 | - | NZ_LT906462.1 | Mammaliicoccus stepanovicii |
| 41 | 1614964 | 1615194 | - | NZ_AP018587.1 | Staphylococcus caprae |
| 42 | 1104628 | 1104882 | + | NZ_CP043405.1 | Streptococcus ratti |
| 43 | 1264883 | 1265089 | - | NZ_CP017194.1 | Lactococcus carnosus |
| 44 | 872799 | 873032 | + | NC_008525.1 | Pediococcus pentosaceus ATCC 25745 |
| 45 | 933640 | 933873 | + | NZ_CP053421.1 | Pediococcus acidilactici |
| 46 | 112132 | 112389 | - | NZ_CP032620.1 | Streptococcus koreensis |
| 47 | 2620141 | 2620344 | + | NZ_CP012033.1 | Levilactobacillus koreensis |
| 48 | 818624 | 818821 | + | NZ_CP022680.1 | Streptococcus respiraculi |
| 49 | 1276208 | 1276432 | + | NC_007795.1 | Staphylococcus aureus subsp. aureus NCTC 8325 |
| 50 | 960315 | 960566 | + | NZ_CP014872.1 | Fructilactobacillus lindneri |
| 51 | 1214689 | 1214910 | - | NZ_CP049886.1 | Vagococcus coleopterorum |
| 52 | 110242 | 110439 | - | NZ_CP016953.1 | Streptococcus himalayensis |
| 53 | 597020 | 597238 | - | NZ_CP065729.1 | Macrococcus caseolyticus |
| 54 | 1501195 | 1501419 | - | NZ_CP030105.1 | Lactiplantibacillus plantarum |
| 55 | 2106916 | 2107119 | - | NZ_CP032757.1 | Lactiplantibacillus pentosus |
| 56 | 1621560 | 1621757 | + | NZ_LR134341.1 | Streptococcus pseudoporcinus |
| 57 | 922721 | 922975 | - | NZ_CP019981.1 | Pediococcus inopinatus |
| 58 | 1495003 | 1495248 | - | NZ_LR134089.1 | Staphylococcus saprophyticus |
| 59 | 1030728 | 1030970 | + | NZ_CP040736.1 | Companilactobacillus futsaii |
| 60 | 722146 | 722397 | + | NZ_CP045240.1 | Limosilactobacillus vaginalis |
| 61 | 1757985 | 1758188 | + | NZ_CP019323.1 | Companilactobacillus allii |
| 62 | 652409 | 652645 | + | NZ_CP007601.1 | Staphylococcus capitis subsp. capitis |
| 63 | 1357027 | 1357233 | - | NZ_CP027563.1 | Weissella confusa |
| 64 | 1584897 | 1585145 | - | NZ_CP008724.1 | Staphylococcus xylosus |
| 65 | 394501 | 394722 | + | NZ_LS483343.1 | Streptococcus ferus |
| 66 | 1822719 | 1822964 | + | NZ_CP066042.1 | Staphylococcus saccharolyticus |
| 67 | 1498392 | 1498628 | - | NZ_LR134242.1 | Staphylococcus warneri |
| 68 | 2487225 | 2487461 | + | NC_022737.1 | Staphylococcus pasteuri SP1 |
| 69 | 1521186 | 1521443 | - | NZ_CP064056.1 | Staphylococcus lloydii |
| 70 | 1552794 | 1553033 | - | NZ_CP040586.1 | Furfurilactobacillus rossiae |
| 71 | 801657 | 801896 | - | NZ_CP018199.1 | Staphylococcus succinus |
| 72 | 1566455 | 1566679 | - | NZ_LR594050.1 | Streptococcus porcinus |
| 73 | 1023228 | 1023449 | - | NZ_CP041364.1 | Schleiferilactobacillus harbinensis |
| 74 | 1552163 | 1552399 | - | NZ_CP035288.1 | Staphylococcus epidermidis |
| 75 | 902737 | 902970 | + | NZ_CP039712.1 | Vagococcus zengguangii |
| 76 | 1203869 | 1204123 | - | NZ_CP013237.1 | Streptococcus mutans |
| 77 | 2001763 | 2002020 | + | NZ_CP014835.1 | Streptococcus halotolerans |
| 78 | 1602748 | 1603005 | - | NZ_LS483383.1 | Streptococcus cristatus ATCC 51100 |
| 79 | 1001090 | 1001320 | - | NC_016605.1 | Pediococcus claussenii ATCC BAA-344 |
| 80 | 1115233 | 1115451 | + | NZ_CP047361.1 | Macrococcus canis |
| 81 | 1202361 | 1202609 | + | NZ_CP013114.1 | Staphylococcus equorum |
| 82 | 1838411 | 1838614 | + | NZ_CP059603.1 | Levilactobacillus suantsaii |
| 83 | 1659676 | 1659918 | - | NZ_CP018776.1 | Staphylococcus condimenti |
| 84 | 1521336 | 1521620 | + | NZ_CP047121.1 | Lentilactobacillus hilgardii |
| 85 | 1239593 | 1239826 | + | NZ_CP011366.1 | Salinicoccus halodurans |
| 86 | 1393234 | 1393467 | - | NZ_LS483405.1 | Levilactobacillus brevis |
| 87 | 2466219 | 2466419 | + | NZ_CP060414.1 | Neisseria musculi |
| 88 | 1102628 | 1102831 | - | NZ_LN898144.1 | Paucilactobacillus oligofermentans DSM 15707 = LMG 22743 |
| 89 | 850574 | 850807 | + | NZ_CP014332.1 | Weissella jogaejeotgali |
| 90 | 882162 | 882395 | - | NZ_CP023501.1 | Weissella paramesenteroides |
| 91 | 371891 | 372088 | + | NZ_CP029491.1 | Streptococcus sobrinus |
| 92 | 1869902 | 1870141 | - | NZ_CP012502.1 | Bacillus beveridgei |
| 93 | 2427868 | 2428101 | - | NZ_CP022437.1 | Virgibacillus necropolis |
| 94 | 1089131 | 1089367 | - | NZ_CP061835.1 | Weissella viridescens |
| 95 | 1215774 | 1216022 | - | NZ_CP044499.1 | Lapidilactobacillus dextrinicus |
| 96 | 1076170 | 1076400 | + | NZ_CP068170.1 | Erysipelatoclostridium ramosum |
| 97 | 1634600 | 1634800 | - | NZ_CP031700.1 | Neisseria zalophi |
| 98 | 867429 | 867635 | - | NZ_CP017326.1 | Weissella soli |
| 99 | 1050998 | 1051237 | + | NZ_CP012047.1 | Tetragenococcus halophilus |
| 100 | 97667 | 97888 | - | NZ_CP018888.1 | Amylolactobacillus amylophilus DSM 20533 = JCM 1125 |
| 101 | 465357 | 465596 | - | NZ_CP037940.1 | Weissella cryptocerci |
| 102 | 292996 | 293247 | + | NZ_CP022096.2 | Staphylococcus pettenkoferi |
| 103 | 580004 | 580234 | - | NZ_LR134313.1 | Neisseria canis |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP026116.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF00717.25 | 0.71 | 73 | 231 | opposite-strand | Peptidase S24-like |
| 2 | PF01726.18 | 0.74 | 76 | 218.5 | opposite-strand | LexA DNA binding domain |
| 3 | PF03672.15 | 0.66 | 68 | 2091.0 | same-strand | Uncharacterised protein family (UPF0154) |
++ More..