Result : EXP01499
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP01499 |
| NCBI Accession ID | NC_000913.3 |
| Organism | Escherichia coli K12 |
| Left | 4042039 |
| Right | 4042338 |
| Strand | + |
| Nucleotide Sequence | GTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGACGGATGACATTCTGATCTATCACCTGAAAATGCGTGATTCCGCGAAAGATGCGGTGATCCCGGGTTTGCAGAAAGATTATGAAGAAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAA |
| Sequence | VSVSRVRSITMKCKRLNEVIELLQPAWQKEPDLNLLQFLQKLAKESGFDGELADLTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE |
| Source of smORF | Protein-level |
| Function | cytosol [GO:0005829] The ORF matches to the profile of cl23958. Profile Description: Protein of unknown function (DUF1040). This family consists of several bacterial YihD proteins of unknown function. |
| Pubmed ID | 30796087 |
| Domain | CDD:420115 |
| Functional Category | Gene Ontology/Expression based functional assignment |
| Uniprot ID | P0ADP9 |
| ORF Length (Amino Acid) | 99 |
++ More..
| Conservation Analysis |
No. of Species: 225
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 4293029 | 4293328 | - | NZ_LR134340.1 | Escherichia marmotae |
| 2 | 4374779 | 4375078 | + | NZ_CP061527.1 | Shigella dysenteriae |
| 3 | 2712334 | 2712633 | - | NZ_CP057657.1 | Escherichia fergusonii |
| 4 | 4042039 | 4042338 | + | NC_000913.3 | Escherichia coli str. K-12 substr. MG1655 |
| 5 | 4012448 | 4012747 | + | NZ_AP014857.1 | Escherichia albertii |
| 6 | 4838118 | 4838417 | + | NC_002695.2 | Escherichia coli O157:H7 str. Sakai |
| 7 | 4054726 | 4055025 | + | NC_004337.2 | Shigella flexneri 2a str. 301 |
| 8 | 1063139 | 1063438 | - | NZ_LT556085.1 | Citrobacter amalonaticus |
| 9 | 610994 | 611293 | + | NZ_CP045205.1 | Citrobacter telavivensis |
| 10 | 4116719 | 4117018 | - | NC_013716.1 | Citrobacter rodentium ICC168 |
| 11 | 2004453 | 2004722 | + | NZ_CP053416.1 | Salmonella bongori |
| 12 | 3288117 | 3288386 | - | NZ_CP038469.1 | Citrobacter tructae |
| 13 | 4637942 | 4638211 | - | NZ_CP045845.1 | Kluyvera intermedia |
| 14 | 2273948 | 2274217 | - | NZ_CP044098.1 | Citrobacter portucalensis |
| 15 | 2816220 | 2816489 | + | NZ_CP033744.1 | Citrobacter freundii |
| 16 | 4202833 | 4203132 | + | NC_003197.2 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
| 17 | 4677063 | 4677362 | + | NZ_CP012871.1 | [Enterobacter] lignolyticus |
| 18 | 1776608 | 1776907 | + | NZ_CP026047.1 | Raoultella planticola |
| 19 | 5520239 | 5520538 | - | NZ_CP046672.1 | Raoultella ornithinolytica |
| 20 | 5186265 | 5186564 | - | NZ_CP065838.1 | Klebsiella quasipneumoniae |
| 21 | 22503 | 22802 | + | NC_016845.1 | Klebsiella pneumoniae subsp. pneumoniae HS11286 |
| 22 | 5210963 | 5211262 | - | NZ_CP041247.1 | Raoultella electrica |
| 23 | 5475297 | 5475596 | - | NZ_CP054254.1 | Klebsiella variicola |
| 24 | 2924811 | 2925080 | - | NC_009792.1 | Citrobacter koseri ATCC BAA-895 |
| 25 | 5362467 | 5362766 | - | NZ_CP014007.2 | Kosakonia oryzae |
| 26 | 6120986 | 6121285 | - | NZ_CP036175.1 | Klebsiella huaxiensis |
| 27 | 3120969 | 3121268 | - | NZ_CP045300.1 | Kosakonia arachidis |
| 28 | 4659294 | 4659563 | - | NZ_CP027986.1 | Enterobacter sichuanensis |
| 29 | 5041380 | 5041679 | - | NZ_LR134475.1 | Klebsiella aerogenes |
| 30 | 5367540 | 5367839 | + | NZ_CP015113.1 | Kosakonia radicincitans |
| 31 | 6133161 | 6133430 | - | NZ_CP060111.1 | Klebsiella michiganensis |
| 32 | 3182798 | 3183067 | - | NZ_CP017279.1 | Enterobacter ludwigii |
| 33 | 3623956 | 3624225 | + | NZ_CP045769.1 | Enterobacter cancerogenus |
| 34 | 4578904 | 4579173 | - | NZ_AP022508.1 | Enterobacter bugandensis |
| 35 | 4677472 | 4677741 | - | NZ_CP017184.1 | Enterobacter roggenkampii |
| 36 | 2634140 | 2634409 | + | NZ_CP025034.2 | Enterobacter sp. SGAir0187 |
| 37 | 2502297 | 2502566 | + | NZ_AP019007.1 | Enterobacter oligotrophicus |
| 38 | 5540293 | 5540592 | - | NZ_CP050508.1 | Raoultella terrigena |
| 39 | 4744102 | 4744371 | - | NC_015968.1 | Enterobacter soli |
| 40 | 4798932 | 4799201 | - | NZ_CP009756.1 | Enterobacter cloacae |
| 41 | 3174317 | 3174616 | + | NZ_CP016337.1 | Kosakonia sacchari |
| 42 | 22273 | 22572 | + | NZ_CP063425.1 | Kosakonia pseudosacchari |
| 43 | 831889 | 832158 | - | NZ_CP020388.1 | Pluralibacter gergoviae |
| 44 | 4552761 | 4553060 | - | NZ_CP011602.1 | Phytobacter ursingii |
| 45 | 5054536 | 5054805 | - | NZ_CP043318.1 | Enterobacter chengduensis |
| 46 | 4628976 | 4629275 | - | NZ_CP035129.1 | Kosakonia cowanii |
| 47 | 423220 | 423519 | - | NZ_CP051548.1 | Phytobacter diazotrophicus |
| 48 | 3432949 | 3433218 | - | NZ_CP023529.1 | Lelliottia amnigena |
| 49 | 26683 | 26952 | + | NZ_CP013990.1 | Leclercia adecarboxylata |
| 50 | 4518803 | 4519072 | - | NZ_CP054058.1 | Scandinavium goeteborgense |
| 51 | 4504272 | 4504541 | - | NZ_AP023184.1 | Buttiauxella agrestis |
| 52 | 4086615 | 4086914 | - | NC_017910.1 | Shimwellia blattae DSM 4481 = NBRC 105725 |
| 53 | 1170685 | 1170930 | - | NZ_CP040428.1 | Jejubacter calystegiae |
| 54 | 4624280 | 4624549 | - | NZ_LR134201.1 | Cedecea lapagei |
| 55 | 4088852 | 4089121 | - | NZ_CP013940.1 | Cronobacter malonaticus LMG 23826 |
| 56 | 5016550 | 5016819 | - | NZ_CP023525.1 | Cedecea neteri |
| 57 | 1683468 | 1683713 | - | NZ_CP042941.1 | Atlantibacter hermannii |
| 58 | 3444936 | 3445205 | + | NZ_CP027107.1 | Cronobacter sakazakii |
| 59 | 4249802 | 4250071 | - | NZ_CP012257.1 | Cronobacter universalis NCTC 9529 |
| 60 | 4408321 | 4408590 | - | NZ_CP012266.1 | Cronobacter dublinensis subsp. dublinensis LMG 23823 |
| 61 | 4325198 | 4325467 | - | NZ_CP012264.1 | Cronobacter condimenti 1330 |
| 62 | 4073214 | 4073483 | + | NZ_CP012268.1 | Cronobacter muytjensii ATCC 51329 |
| 63 | 3757743 | 3758012 | - | NC_012779.2 | Edwardsiella ictaluri 93-146 |
| 64 | 1714703 | 1714972 | - | NZ_CP006664.1 | Edwardsiella anguillarum ET080813 |
| 65 | 1688026 | 1688271 | - | NZ_CP023706.1 | Edwardsiella tarda |
| 66 | 3757547 | 3757816 | - | NZ_CP016043.1 | Edwardsiella hoshinae |
| 67 | 4601949 | 4602218 | - | NC_012880.1 | Musicola paradisiaca Ech703 |
| 68 | 32037 | 32306 | + | NC_014306.1 | Erwinia billingiae Eb661 |
| 69 | 94920 | 95171 | + | NZ_CP038853.1 | Pantoea vagans |
| 70 | 4180419 | 4180688 | - | NZ_CP014137.1 | Brenneria goodwinii |
| 71 | 4624225 | 4624494 | - | NZ_CP050150.1 | Hafnia alvei |
| 72 | 23363 | 23632 | + | NZ_CP009125.1 | Pectobacterium atrosepticum |
| 73 | 1546122 | 1546367 | - | NZ_CP047495.1 | Pectobacterium brasiliense |
| 74 | 19242 | 19487 | + | NZ_LT615367.1 | Dickeya aquatica |
| 75 | 4814397 | 4814672 | - | NZ_CP031560.1 | Dickeya dianthicola |
| 76 | 4757950 | 4758219 | - | NZ_CP034036.1 | Brenneria nigrifluens DSM 30175 = ATCC 13028 |
| 77 | 4714704 | 4714973 | - | NZ_CP038498.1 | Pectobacterium punjabense |
| 78 | 4817339 | 4817608 | - | NZ_CP051652.1 | Pectobacterium carotovorum |
| 79 | 4916684 | 4916953 | - | NZ_CP065044.1 | Pectobacterium aroidearum |
| 80 | 3785715 | 3785984 | + | NZ_CP017482.1 | Pectobacterium polaris |
| 81 | 1758408 | 1758677 | + | NZ_CP015750.1 | Pectobacterium wasabiae CFBP 3304 |
| 82 | 4652847 | 4653092 | - | NZ_CP025799.1 | Dickeya zeae |
| 83 | 49996 | 50271 | + | NZ_CP042220.2 | Dickeya poaceiphila |
| 84 | 19463 | 19738 | + | NC_014500.1 | Dickeya dadantii 3937 |
| 85 | 2071502 | 2071777 | - | NZ_CP015137.1 | Dickeya solani IPO 2222 |
| 86 | 4674170 | 4674439 | - | NZ_CP046293.1 | Yersinia intermedia |
| 87 | 2884777 | 2885052 | + | NZ_CP009460.1 | Dickeya fangzhongdai |
| 88 | 2661240 | 2661509 | - | NZ_CP009781.1 | Yersinia aldovae 670-83 |
| 89 | 1213748 | 1214017 | - | NZ_CP054043.1 | Yersinia mollaretii ATCC 43969 |
| 90 | 4163439 | 4163708 | + | NZ_CP015749.1 | Pectobacterium parmentieri |
| 91 | 23760 | 24029 | + | NZ_CP043727.1 | Yersinia canariae |
| 92 | 4928051 | 4928320 | - | NZ_CP034938.1 | Pectobacterium odoriferum |
| 93 | 4480989 | 4481258 | - | NZ_CP034752.1 | Jinshanibacter zhutongyuii |
| 94 | 3932012 | 3932281 | - | NZ_CP034035.1 | Brenneria rubrifaciens |
| 95 | 86153 | 86395 | + | NZ_CP034148.1 | Pantoea agglomerans |
| 96 | 4704075 | 4704320 | - | NC_012912.1 | Dickeya chrysanthemi Ech1591 |
| 97 | 2913219 | 2913488 | + | NZ_CP009787.1 | Yersinia rohdei |
| 98 | 4671443 | 4671712 | - | NZ_CP011118.1 | Yersinia enterocolitica |
| 99 | 4555379 | 4555624 | - | NZ_LR134373.1 | Yersinia pseudotuberculosis |
| 100 | 27242 | 27511 | + | NZ_CP032487.1 | Yersinia hibernica |
| 101 | 92031 | 92306 | + | NZ_CP045720.1 | Pantoea eucalypti |
| 102 | 1643962 | 1644207 | + | NZ_CP007230.1 | Yersinia similis |
| 103 | 1058410 | 1058664 | - | NZ_CP023009.1 | Lonsdalea britannica |
| 104 | 2228389 | 2228661 | - | NZ_CP011078.1 | Yersinia ruckeri |
| 105 | 3753518 | 3753787 | - | NZ_LS483470.1 | Leminorella richardii |
| 106 | 985983 | 986228 | + | NZ_CP007044.2 | Chania multitudinisentens RB-25 |
| 107 | 3831102 | 3831371 | - | NZ_LR134531.1 | Pragia fontium |
| 108 | 3629414 | 3629683 | - | NZ_CP029185.2 | Limnobaculum parvum |
| 109 | 5094617 | 5094862 | + | NZ_CP071320.1 | Serratia ureilytica |
| 110 | 4409836 | 4410081 | - | NZ_CP016948.1 | Serratia surfactantfaciens |
| 111 | 5201439 | 5201684 | - | NZ_CP038662.1 | Serratia nematodiphila |
| 112 | 3105331 | 3105573 | - | NC_010554.1 | Proteus mirabilis HI4320 |
| 113 | 1663050 | 1663319 | + | NZ_CP019706.1 | Pantoea alhagi |
| 114 | 5387411 | 5387680 | - | NC_015567.1 | Serratia plymuthica AS9 |
| 115 | 1723473 | 1723742 | - | NZ_CP011254.1 | Serratia fonticola |
| 116 | 3767884 | 3768138 | - | NZ_CP065534.1 | Lonsdalea populi |
| 117 | 3703675 | 3703944 | - | NZ_CP028271.1 | Mixta intestinalis |
| 118 | 1448823 | 1449068 | - | NZ_CP065640.1 | Serratia rubidaea |
| 119 | 5320428 | 5320697 | - | NZ_LR134494.1 | Serratia quinivorans |
| 120 | 2564196 | 2564465 | + | NZ_CP014136.1 | Gibbsiella quercinecans |
| 121 | 4694994 | 4695236 | - | NZ_CP006569.1 | Sodalis praecaptivus |
| 122 | 4499785 | 4500054 | - | NZ_CP026377.1 | Mixta gaviniae |
| 123 | 103872 | 104147 | + | NC_017554.1 | Pantoea ananatis PA13 |
| 124 | 5150554 | 5150823 | - | NZ_LT906479.1 | Serratia ficaria |
| 125 | 5246584 | 5246853 | - | NZ_CP048784.1 | Serratia liquefaciens |
| 126 | 338092 | 338361 | + | NZ_CP048796.1 | Providencia vermicola |
| 127 | 1252784 | 1253026 | - | NZ_CP026364.1 | Proteus hauseri |
| 128 | 2925045 | 2925320 | + | NZ_CP049115.1 | Pantoea stewartii |
| 129 | 3636861 | 3637103 | - | NZ_CP047349.1 | Proteus terrae subsp. cibarius |
| 130 | 698682 | 698951 | - | NZ_CP023536.1 | Providencia alcalifaciens |
| 131 | 475795 | 476064 | - | NZ_CP029736.1 | Providencia rettgeri |
| 132 | 4165973 | 4166242 | + | NZ_CP031123.2 | Providencia huaxiensis |
| 133 | 3894894 | 3895163 | - | NZ_FO704550.1 | Xenorhabdus doucetiae |
| 134 | 398177 | 398431 | + | NZ_LS483422.1 | Providencia heimbachae |
| 135 | 1308938 | 1309189 | - | NZ_CP014056.2 | Grimontia hollisae |
| 136 | 2465144 | 2465410 | + | NZ_AP018689.1 | Vibrio aphrogenes |
| 137 | 3612863 | 3613132 | + | NZ_CP016176.1 | Xenorhabdus hominickii |
| 138 | 37777 | 38046 | + | NC_010694.1 | Erwinia tasmaniensis Et1/99 |
| 139 | 2025312 | 2025578 | - | NZ_CP016605.1 | Bisgaardia hudsonensis |
| 140 | 4388 | 4651 | - | NZ_CP009056.1 | Frischella perrara |
| 141 | 3126533 | 3126802 | - | NZ_FO704551.1 | Xenorhabdus poinarii G6 |
| 142 | 25415 | 25684 | + | NZ_LN907827.1 | Erwinia gerundensis |
| 143 | 304907 | 305185 | + | NZ_CP070624.1 | Photobacterium damselae subsp. damselae |
| 144 | 3335494 | 3335760 | - | NZ_CP044399.1 | Moritella marina ATCC 15381 |
| 145 | 2906320 | 2906586 | - | NZ_AP019657.1 | Vibrio ponticus |
| 146 | 3461351 | 3461617 | - | NZ_LT960611.1 | Vibrio tapetis subsp. tapetis |
| 147 | 2736376 | 2736642 | + | NZ_AP018685.1 | Vibrio rumoiensis |
| 148 | 2095598 | 2095864 | + | NZ_LT906448.1 | Pasteurella dagmatis |
| 149 | 4194166 | 4194435 | - | NZ_CP061511.1 | Mixta calida |
| 150 | 3478217 | 3478483 | + | NZ_CP071325.1 | Photobacterium ganghwense |
| 151 | 3404579 | 3404842 | - | NZ_CP051883.1 | Aeromonas salmonicida |
| 152 | 812507 | 812773 | + | NZ_LS483458.1 | Haemophilus haemolyticus |
| 153 | 2942416 | 2942682 | + | NZ_AP019651.1 | Vibrio taketomensis |
| 154 | 296418 | 296660 | + | NZ_CP005974.1 | Photobacterium gaetbulicola Gung47 |
| 155 | 1177771 | 1178037 | + | NZ_CP028926.1 | Pasteurella multocida |
| 156 | 50752 | 51015 | - | NC_011312.1 | Aliivibrio salmonicida LFI1238 |
| 157 | 457627 | 457893 | - | NZ_LT906463.1 | Haemophilus pittmaniae |
| 158 | 503816 | 504082 | + | NZ_LR134510.1 | Actinobacillus delphinicola |
| 159 | 344400 | 344642 | + | NZ_LS483443.1 | Aggregatibacter segnis ATCC 33393 |
| 160 | 3595916 | 3596161 | - | NZ_CP067057.1 | Rahnella aceris |
| 161 | 4692514 | 4692777 | - | NZ_CP050851.1 | Aeromonas hydrophila |
| 162 | 328828 | 329094 | - | NZ_CP018804.1 | Histophilus somni |
| 163 | 54781 | 55047 | - | NZ_CP046268.1 | Vibrio spartinae |
| 164 | 3668751 | 3669014 | + | NZ_CP065745.1 | Aeromonas allosaccharophila |
| 165 | 3423905 | 3424168 | + | NZ_CP044060.1 | Aeromonas veronii |
| 166 | 119966 | 120208 | + | NZ_LR134167.1 | Avibacterium volantium |
| 167 | 2907929 | 2908195 | + | NZ_AP014524.1 | Vibrio cholerae MS6 |
| 168 | 1617440 | 1617706 | + | NZ_CP015031.1 | Basfia succiniciproducens |
| 169 | 2015073 | 2015339 | + | NC_006300.1 | [Mannheimia] succiniciproducens MBEL55E |
| 170 | 417201 | 417467 | + | NZ_LR134327.1 | Aggregatibacter aphrophilus ATCC 33389 |
| 171 | 97100 | 97387 | + | NZ_LR134376.1 | Aeromonas encheleia |
| 172 | 2567402 | 2567668 | + | NZ_CP035688.1 | Vibrio metoecus |
| 173 | 89513 | 89776 | + | NZ_CP040449.1 | Aeromonas simiae |
| 174 | 140824 | 141111 | + | NZ_AP022188.1 | Aeromonas media |
| 175 | 2096455 | 2096700 | - | NZ_CP006954.1 | Bibersteinia trehalosi USDA-ARS-USMARC-188 |
| 176 | 3252304 | 3252570 | + | NZ_CP031781.1 | Vibrio parahaemolyticus |
| 177 | 458663 | 458929 | - | NC_013456.1 | Vibrio antiquarius |
| 178 | 4297569 | 4297814 | - | NZ_CP015581.1 | Tatumella citrea |
| 179 | 3221848 | 3222114 | + | NZ_CP030788.1 | Vibrio campbellii |
| 180 | 3147337 | 3147603 | - | NZ_CP018312.1 | Vibrio rotiferianus |
| 181 | 1806383 | 1806649 | + | NZ_CP019959.1 | Vibrio owensii |
| 182 | 2279453 | 2279719 | - | NZ_CP025792.1 | Vibrio jasicida 090810c |
| 183 | 2950791 | 2951057 | - | NZ_CP009977.1 | Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 |
| 184 | 531187 | 531429 | - | NZ_CP040990.1 | Vibrio furnissii |
| 185 | 155545 | 155811 | - | NZ_CP009610.1 | Haemophilus influenzae |
| 186 | 112072 | 112338 | + | NZ_CP044069.1 | Vibrio vulnificus |
| 187 | 165628 | 165894 | - | NZ_LS483429.1 | Haemophilus aegyptius |
| 188 | 2696189 | 2696455 | + | NZ_CP014035.2 | Vibrio fluvialis |
| 189 | 177228 | 177494 | + | NZ_CP009467.1 | Vibrio harveyi |
| 190 | 1505792 | 1506058 | + | NZ_CP040863.1 | Rodentibacter heylii |
| 191 | 1845789 | 1846058 | + | NZ_CP046793.1 | Vibrio metschnikovii |
| 192 | 2959173 | 2959439 | + | NZ_CP016414.1 | Vibrio scophthalmi |
| 193 | 30423 | 30689 | - | NZ_CP009354.1 | Vibrio tubiashii ATCC 19109 |
| 194 | 48122 | 48364 | + | NZ_CP007445.1 | Gilliamella apicola |
| 195 | 66217 | 66459 | - | NZ_CP045350.1 | Vibrio aquimaris |
| 196 | 68236 | 68505 | - | NZ_CP047475.1 | Vibrio astriarenae |
| 197 | 2441074 | 2441337 | - | NZ_LS483250.1 | Moritella yayanosii |
| 198 | 3609938 | 3610183 | - | NC_014541.1 | Ferrimonas balearica DSM 9799 |
| 199 | 29533 | 29799 | - | NZ_CP022741.1 | Vibrio qinghaiensis |
| 200 | 2239919 | 2240197 | + | NZ_CP016180.1 | Pasteurella skyensis |
| 201 | 3107530 | 3107796 | + | NZ_CP032093.1 | Vibrio alfacsensis |
| 202 | 3300177 | 3300440 | + | NZ_CP039700.1 | Vibrio cyclitrophicus |
| 203 | 2764779 | 2765021 | - | NZ_CP051180.1 | Ferrimonas lipolytica |
| 204 | 1482914 | 1483177 | - | NZ_CP065150.1 | Vibrio kanaloae |
| 205 | 3270526 | 3270789 | + | NC_011753.2 | Vibrio atlanticus |
| 206 | 33979 | 34245 | - | NZ_CP033078.1 | Vibrio zhugei |
| 207 | 1534331 | 1534600 | + | NZ_CP060414.1 | Neisseria musculi |
| 208 | 31609 | 31875 | - | NZ_AP014635.1 | Vibrio tritonius |
| 209 | 263444 | 263725 | - | NZ_CP022278.1 | Neisseria chenwenguii |
| 210 | 3259581 | 3259847 | - | NC_012691.1 | Tolumonas auensis DSM 9187 |
| 211 | 69346 | 69609 | + | NZ_CP028897.1 | Dongshaea marina |
| 212 | 366200 | 366445 | - | NZ_CP016604.1 | Otariodibacter oris |
| 213 | 682622 | 682891 | - | NZ_CP046531.1 | Mannheimia ovis |
| 214 | 727272 | 727541 | - | NZ_CP055305.1 | Mannheimia pernigra |
| 215 | 2802411 | 2802689 | + | NZ_CP040021.1 | Salinivibrio kushneri |
| 216 | 1774526 | 1774795 | + | NZ_CP009159.1 | Actinobacillus suis ATCC 33415 |
| 217 | 2144499 | 2144768 | + | NZ_CP030753.1 | Actinobacillus pleuropneumoniae |
| 218 | 911474 | 911743 | - | NZ_CP015029.1 | Frederiksenia canicola |
| 219 | 1778020 | 1778265 | - | NC_011852.1 | Glaesserella parasuis SH0165 |
| 220 | 1784789 | 1785058 | + | NZ_CP007715.1 | Actinobacillus equuli subsp. equuli |
| 221 | 98920 | 99183 | - | NC_008709.1 | Psychromonas ingrahamii 37 |
| 222 | 143691 | 143945 | - | NZ_CP061280.1 | Mannheimia bovis |
| 223 | 301847 | 302101 | - | NZ_CP006944.1 | Mannheimia varigena USDA-ARS-USMARC-1312 |
| 224 | 177689 | 177958 | + | NZ_CP029206.1 | Actinobacillus porcitonsillarum |
| 225 | 382618 | 382860 | - | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 226 | 923431 | 923700 | + | NC_021883.1 | Mannheimia haemolytica USMARC_2286 |
| 227 | 576059 | 576313 | - | NZ_CP015425.1 | [Haemophilus] ducreyi |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LR134340.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF01323.22 | 0.94 | 212 | 1090.0 | same-strand | DSBA-like thioredoxin domain |
| 2 | PF13462.8 | 0.96 | 215 | 1090 | same-strand | Thioredoxin |
| 3 | PF01636.25 | 0.81 | 183 | 77.0 | same-strand | Phosphotransferase enzyme family |
| 4 | PF12804.9 | 0.74 | 166 | 81.5 | opposite-strand | MobA-like NTP transferase domain |
| 5 | PF03205.16 | 0.66 | 149 | 651 | opposite-strand | Molybdopterin guanine dinucleotide synthesis protein B |
++ More..