Protein Information |
Information Type | Description |
---|---|
Protein name | EXP01485 |
NCBI Accession ID | NC_017502.1 |
Organism | Mycoplasma gallisepticum R(high) |
Left | 663853 |
Right | 664146 |
Strand | - |
Nucleotide Sequence | ATGAATATTAAACCACTACACGATAATGTTTTAGTTGAAGTTTTAGCTGAAGCAAAAACTTCAAAATTAGGGATCATTACAACTATTCAAAACCCTGACAAAGCGACATCAACCAAAGGTTTAGTAATCGCTTTGGGTGATGGGATGATCTATGCTAAACAACAAAAAGTTGATTATCAAATTAAGGTTAATGACCATGTTTATTTTAAGGAATATTCAGGGACAGAGATCGTAGTTAATGATAAAACTTATAAGATCTTAAGTTATGAAGAAATCATTGGGGTAATTAGATAA |
Sequence | MNIKPLHDNVLVEVLAEAKTSKLGIITTIQNPDKATSTKGLVIALGDGMIYAKQQKVDYQIKVNDHVYFKEYSGTEIVVNDKTYKILSYEEIIGVIR |
Source of smORF | Protein-level |
Function | The ORF matches to the profile of cl09113. Profile Description: N/A. This family contains GroES and Gp31-like chaperonins. Gp31 is a functional co-chaperonin that is required for the folding and assembly of Gp23, a major capsid protein, during phage morphogenesis. |
Pubmed ID | 30796087 |
Domain | CDD:415587 |
Functional Category | Conserved domain based functional assignment |
Uniprot ID | |
ORF Length (Amino Acid) | 97 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 619806 | 620099 | - | NC_018406.1 | Mycoplasma gallisepticum VA94_7994-1-7P |
2 | 589602 | 589895 | - | NZ_CP059674.1 | Mycoplasma tullyi |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF00154.23 | 1.0 | 2 | 2924.5 | same-strand | recA bacterial DNA recombination protein |
2 | PF08423.13 | 1.0 | 2 | 2924.5 | same-strand | Rad51 |
3 | PF00118.26 | 1.0 | 2 | 0.0 | same-strand | TCP-1/cpn60 chaperonin family |
4 | PF00365.22 | 1.0 | 2 | 1548.5 | same-strand | Phosphofructokinase |