Result : EXP01457
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP01457 |
| NCBI Accession ID | NZ_CP009472.1 |
| Organism | Lactococcus lactis strain AI06 |
| Left | 21534 |
| Right | 21803 |
| Strand | + |
| Nucleotide Sequence | ATGAGATTAGATAAGTTTTTAAAAGTTTCGCGCTTGATTAAACGTCGTCCAGTTGCGAAAGAAGTTGCCGACAAAGGTCGGATTAAAATTAATGGAAAATTAGCGAAATCTTCATCTGATGTAAAATTTAATGACACAATTGAAATTCGTTTCGGAAATAAAATTGTTGAAGTTCGGGTTGCTGAATTAAAAGAGTTTACACGTAAAGAAGATGCTGATAAAATGTATGAAATGATTAGCGAAACTCGTATTACAGAAGAAGTTGAGTAA |
| Sequence | MRLDKFLKVSRLIKRRPVAKEVADKGRIKINGKLAKSSSDVKFNDTIEIRFGNKIVEVRVAELKEFTRKEDADKMYEMISETRITEEVE |
| Source of smORF | Protein-level |
| Function | RNA binding [GO:0003723] The ORF matches to the profile of cl09940. Profile Description: N/A. This domain is found at the C-terminus of fungal tyrosyl-tRNA synthetases. It binds to group I introns. |
| Pubmed ID | 30796087 |
| Domain | CDD:415814 |
| Functional Category | Gene Ontology/Expression based functional assignment |
| Uniprot ID | Q9KGI8 |
| ORF Length (Amino Acid) | 89 |
++ More..
| Conservation Analysis |
No. of Species: 437
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 18934 | 19203 | + | NC_022369.1 | Lactococcus lactis subsp. cremoris KW2 |
| 2 | 223300 | 223569 | + | NZ_CP070872.1 | Lactococcus taiwanensis |
| 3 | 2149783 | 2150055 | + | NZ_CP032627.1 | Lactococcus allomyrinae |
| 4 | 294528 | 294800 | - | NZ_CP065637.1 | Lactococcus garvieae |
| 5 | 9256 | 9522 | + | NZ_LS483383.1 | Streptococcus cristatus ATCC 51100 |
| 6 | 9549 | 9821 | + | NZ_AP014612.1 | Streptococcus troglodytae |
| 7 | 11840 | 12112 | + | NZ_LR594046.1 | Streptococcus dysgalactiae |
| 8 | 2831512 | 2831787 | - | NZ_CP018061.1 | Enterococcus mundtii |
| 9 | 11855 | 12127 | + | NZ_CP031733.1 | Streptococcus chenjunshii |
| 10 | 2100066 | 2100338 | + | NZ_CP014699.1 | Streptococcus pantholopis |
| 11 | 3162177 | 3162443 | - | NC_020995.1 | Enterococcus casseliflavus EC20 |
| 12 | 9931 | 10203 | + | NZ_LS483403.1 | Streptococcus lutetiensis |
| 13 | 9734 | 10006 | + | NZ_CP025536.1 | Streptococcus pluranimalium |
| 14 | 1581838 | 1582110 | - | NZ_CP013237.1 | Streptococcus mutans |
| 15 | 10339 | 10611 | + | NZ_CP065061.1 | Streptococcus equi subsp. zooepidemicus |
| 16 | 587574 | 587840 | - | NZ_CP016953.1 | Streptococcus himalayensis |
| 17 | 8906 | 9178 | + | NZ_CP010450.1 | Streptococcus pyogenes |
| 18 | 10283 | 10555 | + | NZ_LR594050.1 | Streptococcus porcinus |
| 19 | 15625 | 15885 | + | NZ_CP017194.1 | Lactococcus carnosus |
| 20 | 2249255 | 2249515 | - | NZ_CP017195.1 | Lactococcus paracarnosus |
| 21 | 17140 | 17412 | + | NZ_CP039457.1 | Streptococcus pasteurianus |
| 22 | 8840 | 9106 | + | NZ_CP034543.1 | Streptococcus periodonticum |
| 23 | 567356 | 567628 | - | NZ_LR134293.1 | Streptococcus canis |
| 24 | 812105 | 812377 | + | NZ_CP054015.1 | Streptococcus gallolyticus |
| 25 | 8653 | 8928 | + | NC_017581.1 | Streptococcus thermophilus JIM 8232 |
| 26 | 9388 | 9663 | + | NZ_LR134275.1 | Streptococcus vestibularis |
| 27 | 1042872 | 1043132 | + | NZ_CP023392.1 | Lactococcus raffinolactis |
| 28 | 604630 | 604902 | + | NZ_CP043405.1 | Streptococcus ratti |
| 29 | 1220110 | 1220382 | - | NZ_LR134341.1 | Streptococcus pseudoporcinus |
| 30 | 9932 | 10204 | + | NZ_LR134512.1 | Streptococcus agalactiae |
| 31 | 10226 | 10498 | + | NZ_CP029491.1 | Streptococcus sobrinus |
| 32 | 559010 | 559276 | - | NZ_CP032620.1 | Streptococcus koreensis |
| 33 | 8976 | 9248 | + | NZ_LS483343.1 | Streptococcus ferus |
| 34 | 1560438 | 1560710 | - | NZ_CP014835.1 | Streptococcus halotolerans |
| 35 | 8324 | 8590 | + | NC_015875.1 | Streptococcus pseudopneumoniae IS7493 |
| 36 | 2462975 | 2463241 | - | NZ_CP023074.1 | Enterococcus thailandicus |
| 37 | 9066 | 9332 | + | NZ_CP012805.1 | Streptococcus anginosus |
| 38 | 2461716 | 2461985 | - | NC_020207.1 | Enterococcus faecium ATCC 8459 = NRRL B-2354 |
| 39 | 2514245 | 2514514 | - | NZ_CP065211.1 | Enterococcus lactis |
| 40 | 1787028 | 1787294 | - | NZ_CP032621.1 | Streptococcus gwangjuense |
| 41 | 852684 | 852959 | + | NZ_CP023011.2 | Enterococcus hirae |
| 42 | 8837 | 9103 | + | NZ_LS483436.1 | Streptococcus intermedius |
| 43 | 2014491 | 2014766 | - | NZ_CP021874.1 | Enterococcus wangshanyuanii |
| 44 | 9685 | 9975 | - | NZ_CP022680.1 | Streptococcus respiraculi |
| 45 | 2174170 | 2174436 | - | NZ_LR594049.1 | Streptococcus gordonii |
| 46 | 1987573 | 1987845 | + | NZ_LT906439.1 | Streptococcus merionis |
| 47 | 793148 | 793435 | + | NZ_CP015196.1 | Streptococcus marmotae |
| 48 | 9785 | 10057 | + | NC_012924.1 | Streptococcus suis SC84 |
| 49 | 8321 | 8587 | + | NZ_LR134336.1 | Streptococcus oralis ATCC 35037 |
| 50 | 13869 | 14141 | + | NZ_AP018400.1 | Streptococcus ruminantium |
| 51 | 298766 | 299029 | + | NZ_AP022822.1 | Enterococcus saigonensis |
| 52 | 146657 | 146917 | + | NZ_LS483306.1 | Enterococcus cecorum |
| 53 | 2253680 | 2253940 | + | NZ_CP009709.1 | Weizmannia coagulans DSM 1 = ATCC 7050 |
| 54 | 1447120 | 1447410 | + | NC_014136.1 | Leuconostoc kimchii IMSNU 11154 |
| 55 | 1031677 | 1031934 | + | NZ_CP027783.1 | Tetragenococcus osmophilus |
| 56 | 823744 | 824043 | - | NZ_CP053187.1 | Turicibacter sanguinis |
| 57 | 434584 | 434868 | + | NC_018631.1 | Leuconostoc gelidum JB7 |
| 58 | 819086 | 819361 | + | NZ_CP040586.1 | Furfurilactobacillus rossiae |
| 59 | 30825 | 31100 | - | NZ_CP060720.1 | Vagococcus carniphilus |
| 60 | 65311 | 65577 | + | NC_018704.1 | Amphibacillus xylanus NBRC 15112 |
| 61 | 507796 | 508071 | + | NZ_CP049886.1 | Vagococcus coleopterorum |
| 62 | 62046 | 62321 | + | NC_007530.2 | Bacillus anthracis str. 'Ames Ancestor' |
| 63 | 5057597 | 5057872 | - | NZ_CP040336.1 | Bacillus luti |
| 64 | 61932 | 62207 | + | NC_011725.1 | Bacillus cereus B4264 |
| 65 | 61674 | 61949 | + | NZ_CP032365.1 | Bacillus wiedmannii |
| 66 | 2281889 | 2282146 | - | NZ_CP012047.1 | Tetragenococcus halophilus |
| 67 | 57139 | 57405 | + | NZ_CP015378.1 | Fictibacillus phosphorivorans |
| 68 | 61699 | 61974 | + | NZ_CP064875.1 | Bacillus toyonensis |
| 69 | 945686 | 945961 | - | NZ_CP049887.1 | Vagococcus hydrophili |
| 70 | 66343 | 66609 | + | NZ_CP023704.1 | Caldibacillus thermoamylovorans |
| 71 | 1006401 | 1006691 | + | NZ_CP053988.1 | Abiotrophia defectiva |
| 72 | 1341081 | 1341362 | - | NZ_CP028251.1 | Leuconostoc mesenteroides |
| 73 | 356016 | 356297 | + | NZ_CP015247.1 | Leuconostoc suionicum |
| 74 | 65695 | 65961 | + | NZ_CP065425.1 | Heyndrickxia vini |
| 75 | 2410193 | 2410483 | - | NZ_CP023434.1 | Suicoccus acidiformans |
| 76 | 200940 | 201197 | + | NZ_CP045927.1 | Staphylococcus agnetis |
| 77 | 62422 | 62697 | + | NZ_CP024109.1 | Bacillus cytotoxicus |
| 78 | 589850 | 590104 | + | NZ_CP044499.1 | Lapidilactobacillus dextrinicus |
| 79 | 2106470 | 2106742 | - | NZ_CP047121.1 | Lentilactobacillus hilgardii |
| 80 | 206451 | 206732 | - | NZ_CP018058.1 | Geobacillus thermocatenulatus |
| 81 | 2759759 | 2760040 | + | NZ_CP061470.1 | Geobacillus zalihae |
| 82 | 2329914 | 2330195 | - | NZ_CP061472.1 | Geobacillus thermoleovorans |
| 83 | 1461440 | 1461712 | + | NZ_CP042371.1 | Secundilactobacillus malefermentans |
| 84 | 68921 | 69181 | + | NZ_CP053376.1 | Bacillus amyloliquefaciens |
| 85 | 3862362 | 3862622 | - | NZ_CP011937.1 | Bacillus velezensis |
| 86 | 658787 | 659065 | - | NZ_CP042374.1 | Leuconostoc carnosum |
| 87 | 132047 | 132328 | + | NZ_CP030105.1 | Lactiplantibacillus plantarum |
| 88 | 90085 | 90375 | + | NZ_CP006837.1 | Lysinibacillus varians |
| 89 | 4631417 | 4631707 | - | NZ_CP019980.1 | Lysinibacillus sphaericus |
| 90 | 1478273 | 1478533 | - | NZ_CP043404.1 | Bacillus safensis |
| 91 | 3199087 | 3199362 | + | NZ_CP064060.1 | Anoxybacillus caldiproteolyticus |
| 92 | 2719883 | 2720140 | - | NZ_CP038012.1 | Sporosarcina pasteurii |
| 93 | 2297079 | 2297336 | - | NZ_CP008747.1 | Staphylococcus hyicus |
| 94 | 333884 | 334147 | + | NZ_CP065712.1 | Staphylococcus auricularis |
| 95 | 3163288 | 3163563 | - | NZ_CP014342.1 | Geobacillus subterraneus |
| 96 | 65889 | 66161 | + | NC_010556.1 | Exiguobacterium sibiricum 255-15 |
| 97 | 46946 | 47206 | + | NZ_CP011150.1 | Bacillus altitudinis |
| 98 | 576226 | 576507 | + | NZ_CP032757.1 | Lactiplantibacillus pentosus |
| 99 | 90585 | 90845 | + | NZ_CP017267.1 | Vagococcus teuberi |
| 100 | 130816 | 131109 | + | NZ_CP042410.1 | Leuconostoc citreum |
| 101 | 1941589 | 1941849 | - | NZ_CP029364.1 | Bacillus halotolerans |
| 102 | 1966458 | 1966733 | - | NZ_CP039712.1 | Vagococcus zengguangii |
| 103 | 66159 | 66440 | + | NC_006510.1 | Geobacillus kaustophilus HTA426 |
| 104 | 618151 | 618414 | + | NZ_CP017713.1 | Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 |
| 105 | 75378 | 75641 | + | NZ_LT603683.1 | Bacillus glycinifermentans |
| 106 | 1692338 | 1692607 | - | NZ_CP053421.1 | Pediococcus acidilactici |
| 107 | 1267118 | 1267390 | + | NZ_CP059603.1 | Levilactobacillus suantsaii |
| 108 | 67759 | 68019 | + | NZ_CP048852.1 | Bacillus tequilensis |
| 109 | 48143 | 48403 | + | NZ_CP013984.1 | Bacillus inaquosorum |
| 110 | 67877 | 68137 | + | NC_000964.3 | Bacillus subtilis subsp. subtilis str. 168 |
| 111 | 67568 | 67828 | + | NZ_CP034943.1 | Bacillus subtilis subsp. spizizenii ATCC 6633 = JCM 2499 |
| 112 | 203715 | 203975 | + | NZ_CP033052.1 | Bacillus vallismortis |
| 113 | 2022498 | 2022761 | - | NZ_CP022983.1 | Cytobacillus kochii |
| 114 | 2494158 | 2494421 | - | NZ_AP012544.1 | Lacticaseibacillus casei DSM 20011 = JCM 1134 = ATCC 393 |
| 115 | 2513329 | 2513592 | + | NZ_CP030926.1 | Peribacillus butanolivorans |
| 116 | 2500297 | 2500560 | - | NZ_CP017704.1 | Peribacillus simplex NBRC 15720 = DSM 1321 |
| 117 | 1517188 | 1517457 | - | NC_008525.1 | Pediococcus pentosaceus ATCC 25745 |
| 118 | 72002 | 72262 | + | NZ_CP012024.1 | Bacillus smithii |
| 119 | 126369 | 126638 | - | NZ_CP014912.1 | Secundilactobacillus paracollinoides |
| 120 | 1103853 | 1104128 | - | NZ_CP037940.1 | Weissella cryptocerci |
| 121 | 448951 | 449223 | - | NZ_CP012033.1 | Levilactobacillus koreensis |
| 122 | 1519264 | 1519542 | + | NZ_CP018906.1 | Lentilactobacillus curieae |
| 123 | 1561320 | 1561580 | - | NZ_CP017786.1 | Bacillus xiamenensis |
| 124 | 492402 | 492665 | + | NZ_LR134304.1 | Staphylococcus schweitzeri |
| 125 | 2235725 | 2235991 | - | NZ_LR134242.1 | Staphylococcus warneri |
| 126 | 1693605 | 1693871 | + | NC_022737.1 | Staphylococcus pasteuri SP1 |
| 127 | 1493684 | 1493962 | - | NZ_CP017326.1 | Weissella soli |
| 128 | 2496664 | 2496927 | - | NZ_LS991421.1 | Lacticaseibacillus zeae |
| 129 | 1775708 | 1775998 | - | NZ_CP015108.1 | Sporosarcina ureae |
| 130 | 1550136 | 1550399 | + | NZ_CP063356.1 | Anaerobacillus isosaccharinicus |
| 131 | 161763 | 162020 | - | NZ_CP017560.1 | Sporosarcina ureilytica |
| 132 | 201599 | 201862 | + | NZ_LR134483.1 | Listeria grayi |
| 133 | 2441840 | 2442103 | - | NZ_AP018587.1 | Staphylococcus caprae |
| 134 | 4607604 | 4607894 | - | NZ_CP014616.1 | Sporosarcina psychrophila |
| 135 | 67575 | 67835 | + | NZ_CP051464.1 | Bacillus mojavensis |
| 136 | 4765034 | 4765324 | - | NZ_CP010820.1 | Lysinibacillus fusiformis |
| 137 | 119960 | 120235 | - | NZ_CP015438.1 | Anoxybacillus amylolyticus |
| 138 | 69616 | 69906 | + | NZ_CP031223.1 | Psychrobacillus glaciei |
| 139 | 1825217 | 1825483 | - | NZ_CP041305.1 | Cytobacillus ciccensis |
| 140 | 2300092 | 2300355 | + | NZ_CP007601.1 | Staphylococcus capitis subsp. capitis |
| 141 | 1673120 | 1673386 | - | NZ_CP065729.1 | Macrococcus caseolyticus |
| 142 | 72652 | 72915 | + | NC_006270.3 | Bacillus licheniformis DSM 13 = ATCC 14580 |
| 143 | 99279 | 99542 | + | NZ_CP023665.1 | Bacillus paralicheniformis |
| 144 | 41003 | 41275 | - | NZ_CP029971.1 | Lentilactobacillus kefiri |
| 145 | 272231 | 272500 | + | NC_016605.1 | Pediococcus claussenii ATCC BAA-344 |
| 146 | 2278060 | 2278326 | - | NZ_CP047361.1 | Macrococcus canis |
| 147 | 598161 | 598427 | - | NZ_CP049740.1 | Jeotgalibaca arthritidis |
| 148 | 548882 | 549154 | - | NZ_CP016622.1 | Parageobacillus thermoglucosidasius |
| 149 | 417056 | 417328 | - | NZ_CP070511.1 | Parageobacillus toebii |
| 150 | 4120014 | 4120277 | - | NZ_CP016020.1 | Bacillus weihaiensis |
| 151 | 1946526 | 1946798 | + | NZ_CP018796.1 | Lentilactobacillus parabuchneri |
| 152 | 345155 | 345424 | + | NZ_CP047141.1 | Ligilactobacillus animalis |
| 153 | 61657 | 61947 | + | NZ_CP016540.2 | Planococcus versutus |
| 154 | 182828 | 183085 | + | NZ_CP053989.1 | Niallia circulans |
| 155 | 2134866 | 2135144 | - | NZ_CP027563.1 | Weissella confusa |
| 156 | 1646091 | 1646357 | + | NZ_CP049889.1 | Jeotgalibaca porci |
| 157 | 2641751 | 2642032 | - | NZ_CP016843.1 | Carnobacterium divergens |
| 158 | 2318439 | 2318702 | - | NZ_CP035288.1 | Staphylococcus epidermidis |
| 159 | 1449228 | 1449497 | + | NZ_CP012294.1 | Pediococcus damnosus |
| 160 | 2486460 | 2486726 | - | NZ_CP018776.1 | Staphylococcus condimenti |
| 161 | 87293 | 87583 | + | NZ_CP016543.2 | Planococcus donghaensis |
| 162 | 192307 | 192585 | + | NZ_CP013911.1 | Staphylococcus haemolyticus |
| 163 | 497727 | 497990 | + | NZ_LT906460.1 | Staphylococcus simiae |
| 164 | 52022 | 52288 | - | NZ_CP033460.1 | Staphylococcus debuckii |
| 165 | 115493 | 115771 | + | NZ_CP014332.1 | Weissella jogaejeotgali |
| 166 | 68880 | 69170 | + | NZ_CP016534.2 | Planococcus antarcticus DSM 14505 |
| 167 | 394229 | 394507 | + | NZ_CP014164.1 | Aerococcus viridans |
| 168 | 1800907 | 1801185 | - | NZ_CP013988.1 | Aerococcus urinaeequi |
| 169 | 67221 | 67511 | + | NZ_CP016537.2 | Planococcus halocryophilus |
| 170 | 1076701 | 1076964 | + | NZ_CP066042.1 | Staphylococcus saccharolyticus |
| 171 | 1609287 | 1609550 | - | NZ_CP018199.1 | Staphylococcus succinus |
| 172 | 1259699 | 1259977 | - | NZ_CP014022.1 | Staphylococcus lugdunensis |
| 173 | 61911 | 62168 | + | NZ_CP012152.1 | Anoxybacillus gonensis |
| 174 | 839417 | 839671 | - | NZ_CP014163.1 | Aerococcus urinaehominis |
| 175 | 1694673 | 1694963 | - | NZ_CP013661.2 | Planococcus kocurii |
| 176 | 67907 | 68197 | + | NZ_CP019401.1 | Planococcus faecalis |
| 177 | 2450621 | 2450884 | - | NC_014334.2 | Lacticaseibacillus paracasei |
| 178 | 618041 | 618313 | + | NZ_LS483405.1 | Levilactobacillus brevis |
| 179 | 1497436 | 1497708 | - | NZ_CP011388.1 | Paenibacillus swuensis |
| 180 | 1538501 | 1538779 | - | NZ_CP023501.1 | Weissella paramesenteroides |
| 181 | 1236977 | 1237222 | + | NZ_CP023643.1 | Brochothrix thermosphacta |
| 182 | 240073 | 240330 | - | NZ_CP022437.1 | Virgibacillus necropolis |
| 183 | 701099 | 701359 | + | NZ_CP026520.1 | Paenibacillus chitinolyticus |
| 184 | 2436470 | 2436733 | - | NZ_CP008724.1 | Staphylococcus xylosus |
| 185 | 444445 | 444699 | - | NZ_CP027770.1 | Staphylococcus felis |
| 186 | 73836 | 74108 | + | NC_013791.2 | Alkalihalobacillus pseudofirmus OF4 |
| 187 | 69833 | 70099 | + | NZ_CP024035.1 | Priestia aryabhattai |
| 188 | 2690642 | 2690917 | - | NZ_CP011366.1 | Salinicoccus halodurans |
| 189 | 2763444 | 2763707 | - | NZ_CP068053.1 | Peribacillus psychrosaccharolyticus |
| 190 | 1535149 | 1535421 | - | NZ_CP061835.1 | Weissella viridescens |
| 191 | 2309665 | 2309928 | - | NZ_LR134089.1 | Staphylococcus saprophyticus |
| 192 | 729458 | 729739 | - | NZ_CP033732.1 | Staphylococcus hominis |
| 193 | 52523 | 52810 | - | NZ_CP014872.1 | Fructilactobacillus lindneri |
| 194 | 4509924 | 4510202 | + | NZ_CP013652.1 | Paenibacillus naphthalenovorans |
| 195 | 1491922 | 1492191 | - | NZ_CP019728.1 | Jeotgalibaca dankookensis |
| 196 | 2308783 | 2309046 | - | NZ_CP064056.1 | Staphylococcus lloydii |
| 197 | 4468186 | 4468485 | - | NZ_CP022657.1 | Tumebacillus algifaecis |
| 198 | 3512823 | 3513089 | - | NZ_CP012502.1 | Bacillus beveridgei |
| 199 | 189274 | 189531 | + | NC_014925.1 | Staphylococcus pseudintermedius HKU10-03 |
| 200 | 282943 | 283188 | + | NC_014964.1 | Thermoanaerobacter brockii subsp. finnii Ako-1 |
| 201 | 457345 | 457611 | - | NZ_CP046037.1 | Latilactobacillus sakei |
| 202 | 397971 | 398237 | + | NZ_CP045007.1 | Latilactobacillus graminis |
| 203 | 1076388 | 1076660 | - | NZ_CP032626.1 | Apilactobacillus bombintestini |
| 204 | 301202 | 301474 | + | NZ_CP045605.1 | Limosilactobacillus reuteri |
| 205 | 289779 | 290042 | + | NZ_CP013114.1 | Staphylococcus equorum |
| 206 | 3872412 | 3872702 | + | NZ_CP038015.1 | Paenisporosarcina antarctica |
| 207 | 1379804 | 1380073 | - | NZ_CP011403.1 | Ligilactobacillus salivarius str. Ren |
| 208 | 1512766 | 1513035 | - | NZ_CP019981.1 | Pediococcus inopinatus |
| 209 | 64880 | 65170 | + | NZ_CP016539.2 | Planococcus plakortidis |
| 210 | 368650 | 368892 | + | NZ_CP018809.1 | Lactobacillus jensenii |
| 211 | 1677177 | 1677476 | + | NZ_CP021434.1 | Tumebacillus avium |
| 212 | 306793 | 307062 | + | NZ_CP044534.1 | Limosilactobacillus frumenti |
| 213 | 2230589 | 2230882 | + | NZ_CP017705.1 | Brevibacillus laterosporus DSM 25 |
| 214 | 71202 | 71471 | + | NC_022524.1 | Bacillus infantis NRRL B-14911 |
| 215 | 1309495 | 1309737 | - | NZ_CP029476.1 | Lactobacillus apis |
| 216 | 4666142 | 4666411 | + | NZ_CP018866.1 | Sutcliffiella cohnii |
| 217 | 438679 | 438963 | + | NZ_CP065993.1 | Leuconostoc pseudomesenteroides |
| 218 | 2484467 | 2484712 | - | NC_015958.1 | Thermoanaerobacter wiegelii Rt8.B1 |
| 219 | 30729 | 31001 | + | NZ_CP041364.1 | Schleiferilactobacillus harbinensis |
| 220 | 77002 | 77262 | + | NC_014829.1 | Evansella cellulosilytica DSM 2522 |
| 221 | 167434 | 167694 | + | NZ_CP014324.1 | Oenococcus oeni |
| 222 | 1179971 | 1180237 | - | NZ_CP026116.1 | Latilactobacillus curvatus JCM 1096 = DSM 20019 |
| 223 | 1498697 | 1498939 | - | NZ_CP029477.1 | Lactobacillus kullabergensis |
| 224 | 2368915 | 2369181 | - | NZ_CP022046.2 | Mammaliicoccus sciuri |
| 225 | 170793 | 171050 | + | NZ_LT906464.1 | Staphylococcus muscae |
| 226 | 2095834 | 2096079 | - | NZ_CP009170.1 | Thermoanaerobacter kivui |
| 227 | 3162951 | 3163229 | - | NZ_CP016809.1 | Paenibacillus ihbetae |
| 228 | 364290 | 364532 | + | NZ_CP044496.1 | Lactobacillus acetotolerans |
| 229 | 2065764 | 2066009 | - | NC_014209.1 | Thermoanaerobacter mathranii subsp. mathranii str. A3 |
| 230 | 2176179 | 2176424 | - | NC_013921.1 | Thermoanaerobacter italicus Ab9 |
| 231 | 1097497 | 1097784 | - | NZ_CP045562.1 | Fructilactobacillus fructivorans |
| 232 | 368500 | 368742 | + | NZ_CP059829.1 | Lactobacillus ultunensis |
| 233 | 1409262 | 1409504 | - | NZ_CP029544.1 | Lactobacillus helsingborgensis |
| 234 | 1980047 | 1980310 | + | NZ_CP022096.2 | Staphylococcus pettenkoferi |
| 235 | 2319933 | 2320199 | - | NZ_LT906462.1 | Mammaliicoccus stepanovicii |
| 236 | 3253392 | 3253682 | + | NZ_CP013659.2 | Planococcus rifietoensis |
| 237 | 429301 | 429579 | + | NZ_AP014680.1 | Paucilactobacillus hokkaidonensis JCM 18461 |
| 238 | 1552085 | 1552354 | - | NZ_LN898144.1 | Paucilactobacillus oligofermentans DSM 15707 = LMG 22743 |
| 239 | 285441 | 285707 | + | NZ_CP045240.1 | Limosilactobacillus vaginalis |
| 240 | 778838 | 779101 | - | NZ_CP034465.1 | Jeotgalibaca ciconiae |
| 241 | 8447024 | 8447302 | - | NC_017672.3 | Paenibacillus mucilaginosus K02 |
| 242 | 3160957 | 3161232 | - | NZ_CP035492.1 | Paenibacillus protaetiae |
| 243 | 266975 | 267217 | + | NC_021181.2 | Lactobacillus acidophilus La-14 |
| 244 | 68734 | 69000 | + | NZ_CP042593.1 | Bacillus dafuensis |
| 245 | 309480 | 309722 | + | NZ_CP059276.1 | Lactobacillus taiwanensis |
| 246 | 78874 | 79134 | + | NZ_CP009416.1 | Jeotgalibacillus malaysiensis |
| 247 | 1444829 | 1445089 | - | NZ_CP018622.1 | Virgibacillus dokdonensis |
| 248 | 2291548 | 2291817 | - | NZ_CP054482.1 | Macrococcus bohemicus |
| 249 | 52721 | 52996 | + | NZ_CP034346.1 | Paenibacillus lutimineralis |
| 250 | 65423 | 65713 | + | NZ_CP016538.2 | Planococcus maritimus |
| 251 | 65310 | 65600 | + | NZ_CP059540.1 | Planococcus maritimus |
| 252 | 204941 | 205198 | + | NZ_CP007452.1 | Peptoclostridium acidaminophilum DSM 3953 |
| 253 | 1491946 | 1492203 | + | NZ_CP020773.1 | Staphylococcus lutrae |
| 254 | 881333 | 881605 | - | NZ_CP043611.1 | Paenibacillus antarcticus |
| 255 | 479937 | 480200 | + | NC_007795.1 | Staphylococcus aureus subsp. aureus NCTC 8325 |
| 256 | 121938 | 122222 | - | NZ_CP039710.1 | Thermoactinomyces vulgaris |
| 257 | 51029 | 51307 | + | NZ_CP009288.1 | Paenibacillus durus |
| 258 | 4126754 | 4127032 | - | NZ_CP014167.1 | Paenibacillus yonginensis |
| 259 | 1129789 | 1130046 | - | NZ_CP022315.1 | Virgibacillus phasianinus |
| 260 | 1576637 | 1576879 | - | NZ_CP015444.1 | Lactobacillus helveticus |
| 261 | 966698 | 966970 | - | NZ_CP034248.1 | Paenibacillus lentus |
| 262 | 143183 | 143476 | + | NZ_LR134338.1 | Brevibacillus brevis |
| 263 | 2357601 | 2357867 | + | NZ_CP068061.1 | Mammaliicoccus vitulinus |
| 264 | 3730112 | 3730390 | - | NZ_CP045295.1 | Paenibacillus cellulositrophicus |
| 265 | 1650234 | 1650512 | + | NC_016641.1 | Paenibacillus terrae HPL-003 |
| 266 | 2290010 | 2290288 | + | NZ_CP031092.1 | Salicibibacter kimchii |
| 267 | 1103327 | 1103590 | + | NZ_CP017703.1 | Aeribacillus pallidus |
| 268 | 2329555 | 2329833 | + | NZ_CP045298.1 | Paenibacillus brasilensis |
| 269 | 5605521 | 5605799 | - | NZ_CP020028.1 | Paenibacillus kribbensis |
| 270 | 2148371 | 2148628 | - | NZ_CP008876.1 | Terribacillus goriensis |
| 271 | 255959 | 256252 | - | NZ_AP017312.1 | Aneurinibacillus soli |
| 272 | 88972 | 89262 | + | NZ_CP034118.1 | Staphylospora marina |
| 273 | 246158 | 246400 | + | NZ_CP031835.1 | Lactobacillus amylolyticus |
| 274 | 310236 | 310478 | + | NZ_AP018549.1 | Lactobacillus paragasseri |
| 275 | 307288 | 307530 | + | NC_008530.1 | Lactobacillus gasseri ATCC 33323 = JCM 1131 |
| 276 | 65452 | 65709 | + | NZ_CP024848.1 | Oceanobacillus zhaokaii |
| 277 | 1546700 | 1546981 | - | NZ_CP014161.1 | Aerococcus urinae |
| 278 | 2146229 | 2146492 | - | NZ_CP035485.1 | Salicibibacter halophilus |
| 279 | 506038 | 506280 | + | NZ_LR699011.1 | Roseburia hominis |
| 280 | 262169 | 262435 | + | NZ_CP009577.1 | Listeria ivanovii subsp. ivanovii |
| 281 | 3924928 | 3925206 | - | NC_019897.1 | Thermobacillus composti KWC4 |
| 282 | 2451842 | 2452084 | - | NZ_CP036523.1 | Peptacetobacter hiranonis |
| 283 | 50645 | 50923 | + | NZ_CP004078.1 | Paenibacillus sabinae T27 |
| 284 | 65137 | 65403 | + | NZ_LS483476.1 | Lederbergia lentus |
| 285 | 51250 | 51528 | + | NZ_CP009285.1 | Paenibacillus borealis |
| 286 | 147671 | 147913 | + | NZ_CP019870.1 | Clostridioides difficile |
| 287 | 806611 | 806877 | + | NZ_CP029684.2 | Oenococcus sicerae |
| 288 | 3059073 | 3059333 | - | NC_008261.1 | Clostridium perfringens ATCC 13124 |
| 289 | 54364 | 54642 | + | NZ_CP009286.1 | Paenibacillus stellifer |
| 290 | 208242 | 208508 | + | NC_013891.1 | Listeria seeligeri serovar 1/2b str. SLCC3954 |
| 291 | 222995 | 223261 | + | NC_003210.1 | Listeria monocytogenes EGD-e |
| 292 | 330430 | 330672 | + | NZ_CP061341.1 | Lactobacillus kefiranofaciens |
| 293 | 218237 | 218494 | + | NZ_CP019659.1 | Paenibacillus larvae subsp. larvae |
| 294 | 434189 | 434485 | - | NZ_CP026363.1 | Brevibacillus agri |
| 295 | 2593111 | 2593389 | + | NZ_CP041217.1 | Saccharibacillus brassicae |
| 296 | 262262 | 262501 | + | NC_014410.1 | Thermoanaerobacterium thermosaccharolyticum DSM 571 |
| 297 | 81750 | 81995 | + | NZ_AP021853.1 | Sporolactobacillus terrae |
| 298 | 709667 | 709945 | + | NZ_CP013023.1 | Paenibacillus bovis |
| 299 | 82936 | 83199 | + | NZ_CP041666.1 | Radiobacillus deserti |
| 300 | 395917 | 396204 | + | NZ_CP045563.1 | Fructilactobacillus sanfranciscensis |
| 301 | 3713520 | 3713762 | - | NZ_LR027880.1 | Roseburia intestinalis L1-82 |
| 302 | 284745 | 285008 | + | NZ_CP011102.1 | Listeria weihenstephanensis |
| 303 | 161628 | 161888 | + | NZ_CP017253.2 | Clostridium taeniosporum |
| 304 | 179096 | 179362 | + | NZ_LT906444.1 | Listeria welshimeri |
| 305 | 78306 | 78566 | + | NZ_CP017962.1 | Virgibacillus halodenitrificans |
| 306 | 1963281 | 1963559 | + | NZ_CP048429.1 | Paenibacillus jilunlii |
| 307 | 51023 | 51301 | + | NZ_CP009287.1 | Paenibacillus graminis |
| 308 | 1923215 | 1923493 | + | NZ_CP068595.1 | Paenibacillus sonchi |
| 309 | 51050 | 51328 | + | NZ_LN831776.1 | Paenibacillus riograndensis SBR5 |
| 310 | 7112719 | 7112997 | + | NZ_CP021780.1 | Paenibacillus donghaensis |
| 311 | 63189 | 63467 | + | NZ_CP009428.1 | Paenibacillus odorifer |
| 312 | 5280419 | 5280703 | - | NZ_AP019308.1 | Paenibacillus baekrokdamisoli |
| 313 | 67960 | 68223 | + | NC_004193.1 | Oceanobacillus iheyensis HTE831 |
| 314 | 3358073 | 3358327 | - | NC_015687.1 | Clostridium acetobutylicum DSM 1731 |
| 315 | 2733611 | 2733874 | - | NZ_HG917868.1 | Clostridium bornimense |
| 316 | 2635241 | 2635504 | - | NZ_CP011361.2 | Salimicrobium jeotgali |
| 317 | 3266683 | 3266952 | + | NZ_CP068170.1 | Erysipelatoclostridium ramosum |
| 318 | 4293947 | 4294231 | + | NZ_CP033433.1 | Cohnella candidum |
| 319 | 2854008 | 2854250 | + | NZ_CP045798.1 | Thermoanaerosceptrum fracticalcis |
| 320 | 454458 | 454700 | - | NZ_CP018888.1 | Amylolactobacillus amylophilus DSM 20533 = JCM 1125 |
| 321 | 5329492 | 5329770 | - | NZ_CP045293.1 | Paenibacillus guangzhouensis |
| 322 | 1492205 | 1492444 | + | NZ_CP048000.1 | Anaerocolumna sedimenticola |
| 323 | 92524 | 92790 | + | NC_002570.2 | Alkalihalobacillus halodurans C-125 |
| 324 | 128594 | 128872 | + | NZ_CP048103.1 | Kroppenstedtia eburnea |
| 325 | 3434318 | 3434581 | - | NZ_CP040924.1 | Clostridium thermarum |
| 326 | 74710 | 74991 | + | NZ_AP019400.1 | Cohnella abietis |
| 327 | 319014 | 319256 | + | NZ_AP019750.1 | Lactobacillus delbrueckii subsp. delbrueckii |
| 328 | 1532711 | 1532998 | - | NZ_CP027226.1 | Fastidiosipila sanguinis |
| 329 | 848402 | 848680 | + | NZ_CP034437.1 | Paenibacillus albus |
| 330 | 239518 | 239757 | + | NC_015555.1 | Thermoanaerobacterium xylanolyticum LX-11 |
| 331 | 2330858 | 2331130 | + | NZ_CP011058.1 | Paenibacillus beijingensis |
| 332 | 247540 | 247779 | + | NZ_AP023367.1 | Anaerocolumna cellulosilytica |
| 333 | 3556554 | 3556835 | - | NZ_CP048286.1 | Paenibacillus rhizovicinus |
| 334 | 412733 | 412972 | + | NZ_CP012559.1 | Companilactobacillus heilongjiangensis |
| 335 | 3838580 | 3838858 | + | NZ_CP054614.1 | Paenibacillus barcinonensis |
| 336 | 3442711 | 3443004 | - | NC_006177.1 | Symbiobacterium thermophilum IAM 14863 |
| 337 | 309894 | 310160 | + | NZ_CP045530.1 | Limosilactobacillus pontis |
| 338 | 1113040 | 1113285 | + | NZ_CP030777.1 | Faecalibacterium prausnitzii |
| 339 | 179696 | 179938 | + | NZ_CP014150.1 | Paeniclostridium sordellii |
| 340 | 110186 | 110449 | + | NZ_CP048104.1 | Kroppenstedtia pulmonis |
| 341 | 176294 | 176536 | - | NZ_CP019323.1 | Companilactobacillus allii |
| 342 | 3610848 | 3611108 | - | NZ_CP030775.1 | Clostridium butyricum |
| 343 | 94359 | 94601 | + | NZ_CP031513.1 | Bombilactobacillus bombi |
| 344 | 4625732 | 4625992 | - | NZ_CP015756.1 | Clostridium estertheticum subsp. estertheticum |
| 345 | 76393 | 76650 | + | NC_017668.1 | Halobacillus halophilus DSM 2266 |
| 346 | 1278651 | 1278890 | + | NC_015275.1 | Cellulosilyticum lentocellum DSM 5427 |
| 347 | 2708789 | 2709034 | - | NZ_CP032416.1 | Clostridium fermenticellae |
| 348 | 1937704 | 1937943 | - | NC_012778.1 | [Eubacterium] eligens ATCC 27750 |
| 349 | 4500012 | 4500272 | - | NZ_CP011803.1 | Clostridium carboxidivorans P7 |
| 350 | 1194627 | 1194872 | - | NC_016630.1 | Filifactor alocis ATCC 35896 |
| 351 | 1273014 | 1273265 | - | NZ_LT632322.1 | Murdochiella vaginalis |
| 352 | 123885 | 124142 | - | NZ_CP020772.1 | Halobacillus mangrovi |
| 353 | 2078513 | 2078755 | - | NZ_CP048649.1 | Aminipila butyrica |
| 354 | 152597 | 152842 | + | NC_011837.1 | Clostridium kluyveri NBRC 12016 |
| 355 | 219330 | 219608 | + | NZ_LR134484.1 | Gemella haemolysans |
| 356 | 177952 | 178191 | + | NC_010001.1 | Lachnoclostridium phytofermentans ISDg |
| 357 | 1271403 | 1271642 | + | NZ_CP036170.1 | [Clostridium] scindens ATCC 35704 |
| 358 | 3619722 | 3619961 | - | NC_011898.1 | Ruminiclostridium cellulolyticum H10 |
| 359 | 2126251 | 2126490 | - | NZ_CP017702.1 | Companilactobacillus farciminis KCTC 3681 = DSM 20184 |
| 360 | 2127416 | 2127661 | + | NZ_CP034413.2 | Dysosmobacter welbionis |
| 361 | 3493094 | 3493333 | - | NC_014387.1 | Butyrivibrio proteoclasticus B316 |
| 362 | 5356683 | 5356943 | - | NZ_CP020953.1 | Clostridium drakei |
| 363 | 231636 | 231914 | + | NZ_CP048209.1 | Paenibacillus lycopersici |
| 364 | 422791 | 423048 | + | NZ_CP018180.1 | Liquorilactobacillus nagelii |
| 365 | 4567514 | 4567774 | + | NZ_CP009933.1 | Clostridium scatologenes |
| 366 | 658926 | 659186 | - | NZ_CP046314.1 | Gemella morbillorum |
| 367 | 117805 | 118065 | + | NZ_CP043998.1 | Clostridium diolis |
| 368 | 423289 | 423528 | + | NZ_CP017996.1 | Companilactobacillus crustorum |
| 369 | 1474016 | 1474258 | - | NZ_CP024610.1 | Lactobacillus terrae |
| 370 | 394652 | 394894 | + | NC_014614.1 | Acetoanaerobium sticklandii |
| 371 | 1054005 | 1054265 | - | NZ_CP071376.1 | Clostridium gasigenes |
| 372 | 184973 | 185221 | + | NC_009633.1 | Alkaliphilus metalliredigens QYMF |
| 373 | 2424940 | 2425179 | + | NZ_CP070062.1 | Coprococcus comes |
| 374 | 145686 | 145946 | + | NC_022571.1 | Clostridium saccharobutylicum DSM 13864 |
| 375 | 2228866 | 2229111 | + | NZ_LR130778.1 | Petrocella atlantisensis |
| 376 | 3997083 | 3997340 | - | NZ_CP013019.1 | Clostridium pasteurianum |
| 377 | 4575231 | 4575509 | - | NC_014393.1 | Clostridium cellulovorans 743B |
| 378 | 615987 | 616226 | + | NZ_CP061336.1 | Ruminiclostridium herbifermentans |
| 379 | 1688829 | 1689068 | + | NZ_LT990039.1 | Massilistercora timonensis |
| 380 | 558507 | 558767 | + | NZ_CP014176.1 | Clostridium argentinense |
| 381 | 77504 | 77743 | + | NZ_CP021850.1 | Pseudoclostridium thermosuccinogenes |
| 382 | 2946075 | 2946323 | - | NZ_CP014170.1 | Clostridium tyrobutyricum |
| 383 | 309275 | 309538 | + | NZ_CP034235.1 | Paenibacillus psychroresistens |
| 384 | 2109291 | 2109530 | - | NZ_CP027002.1 | [Ruminococcus] gnavus ATCC 29149 |
| 385 | 1742433 | 1742672 | - | NZ_CP049366.1 | Companilactobacillus pabuli |
| 386 | 3158916 | 3159155 | + | NZ_LT635479.1 | Lachnoclostridium phocaeense |
| 387 | 127176 | 127436 | + | NC_020291.1 | Clostridium saccharoperbutylacetonicum N1-4(HMT) |
| 388 | 2051845 | 2052084 | - | NZ_CP040736.1 | Companilactobacillus futsaii |
| 389 | 80680 | 80937 | + | NZ_CP029797.1 | Paraliobacillus zengyii |
| 390 | 1646608 | 1646871 | - | NZ_CP019573.1 | Abyssicoccus albus |
| 391 | 2497149 | 2497409 | - | NZ_LR590481.1 | Hathewaya histolytica |
| 392 | 187369 | 187608 | + | NZ_LN879430.1 | Herbinix luporum |
| 393 | 171111 | 171371 | + | NZ_CP027286.1 | Clostridium chauvoei |
| 394 | 58214 | 58480 | + | NZ_CP019699.1 | Novibacillus thermophilus |
| 395 | 174768 | 175028 | + | NZ_CP016786.1 | Clostridium isatidis |
| 396 | 2137606 | 2137854 | - | NZ_CP012395.1 | Clostridium autoethanogenum DSM 10061 |
| 397 | 4504836 | 4505084 | - | NC_014328.1 | Clostridium ljungdahlii DSM 13528 |
| 398 | 1935709 | 1935969 | + | NZ_CP023671.1 | Clostridium septicum |
| 399 | 672163 | 672405 | + | NZ_CP034791.1 | Caldicellulosiruptor changbaiensis |
| 400 | 386068 | 386307 | + | NZ_CP027228.1 | Mogibacterium diversum |
| 401 | 3004072 | 3004311 | - | NZ_CP014223.1 | Anaerotignum propionicum DSM 1682 |
| 402 | 1382099 | 1382341 | + | NC_009437.1 | Caldicellulosiruptor saccharolyticus DSM 8903 |
| 403 | 3086253 | 3086492 | - | NZ_CP036345.1 | Anaerostipes caccae L1-92 |
| 404 | 291621 | 291863 | - | NZ_HF545617.1 | Ruminococcus bicirculans |
| 405 | 2609538 | 2609795 | - | NZ_CP013862.1 | Lentibacillus amyloliquefaciens |
| 406 | 283178 | 283417 | + | NZ_CP022464.2 | Enterocloster bolteae |
| 407 | 269255 | 269494 | + | NZ_CP016502.1 | Acetivibrio thermocellus DSM 2360 |
| 408 | 1835073 | 1835315 | - | NC_014833.1 | Ruminococcus albus 7 = DSM 20455 |
| 409 | 1037513 | 1037755 | - | NZ_CP012034.1 | Companilactobacillus ginsenosidimutans |
| 410 | 884473 | 884712 | - | NZ_CP032364.1 | Lachnoanaerobaculum umeaense |
| 411 | 2812110 | 2812349 | - | NZ_CP030280.1 | Blautia argi |
| 412 | 205744 | 206001 | + | NZ_CP014204.2 | Clostridium baratii |
| 413 | 1924915 | 1925154 | - | NZ_CP035130.1 | Gudongella oleilytica |
| 414 | 543844 | 544083 | + | NZ_CP022413.2 | Blautia hansenii DSM 20583 |
| 415 | 1157223 | 1157468 | + | NZ_CP067016.1 | Anaerococcus obesiensis |
| 416 | 542011 | 542256 | + | NZ_CP066014.1 | Anaerococcus vaginalis |
| 417 | 370732 | 370971 | + | NZ_CP040058.1 | Anaerostipes rhamnosivorans |
| 418 | 2492552 | 2492791 | - | NC_018664.1 | Gottschalkia acidurici 9a |
| 419 | 1117149 | 1117397 | - | NZ_LR215050.1 | Acholeplasma hippikon |
| 420 | 576640 | 576912 | - | NZ_CP060715.1 | Erysipelothrix inopinata |
| 421 | 1768146 | 1768391 | - | NZ_LT635772.1 | Anaerococcus mediterraneensis |
| 422 | 4488203 | 4488442 | - | NZ_CP039126.1 | Blautia producta |
| 423 | 2335137 | 2335382 | - | NZ_LT906477.1 | Clostridium cochlearium |
| 424 | 96595 | 96867 | + | NZ_LR134439.1 | Erysipelothrix rhusiopathiae |
| 425 | 610451 | 610693 | + | NZ_CP048436.1 | Flavonifractor plautii |
| 426 | 942917 | 943198 | + | NZ_CP014159.1 | Aerococcus christensenii |
| 427 | 1804070 | 1804324 | + | NC_022549.1 | Acholeplasma brassicae |
| 428 | 342634 | 342906 | + | NZ_CP034234.1 | Erysipelothrix piscisicarius |
| 429 | 1175108 | 1175347 | - | NZ_CP009761.1 | Parvimonas micra |
| 430 | 4403451 | 4403690 | - | NC_014376.1 | [Clostridium] saccharolyticum WM1 |
| 431 | 1449112 | 1449360 | + | NC_010163.1 | Acholeplasma laidlawii PG-8A |
| 432 | 733608 | 733901 | + | NC_013895.2 | Mageeibacillus indolicus UPII9-5 |
| 433 | 2004957 | 2005202 | - | NZ_AP019827.1 | Leptotrichia shahii |
| 434 | 3445237 | 3445476 | - | NC_016894.1 | Acetobacterium woodii DSM 1030 |
| 435 | 2340481 | 2340726 | - | NC_003869.1 | Caldanaerobacter subterraneus subsp. tengcongensis MB4 |
| 436 | 1903902 | 1904141 | - | NZ_CP029487.1 | Eubacterium maltosivorans |
| 437 | 1628772 | 1629011 | + | NZ_CP019962.1 | Eubacterium limosum |
| 438 | 3532666 | 3532905 | - | NC_014624.2 | Eubacterium callanderi |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP018061.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF17757.3 | 0.66 | 290 | 1886 | same-strand | UvrB interaction domain |
| 2 | PF02559.18 | 0.67 | 292 | 1886 | same-strand | CarD-like/TRCF domain |
| 3 | PF03461.17 | 0.67 | 292 | 1821 | same-strand | TRCF domain |
| 4 | PF00271.33 | 0.66 | 290 | 1886 | same-strand | Helicase conserved C-terminal domain |
| 5 | PF00270.31 | 0.67 | 292 | 1959 | same-strand | DEAD/DEAH box helicase |
| 6 | PF04851.17 | 0.67 | 292 | 1959 | same-strand | Type III restriction enzyme, res subunit |
| 7 | PF04977.17 | 0.92 | 401 | 175.5 | same-strand | Septum formation initiator |
| 8 | PF00575.25 | 0.69 | 301 | 1191 | same-strand | S1 RNA binding domain |
| 9 | PF01943.19 | 0.67 | 292 | 1463.0 | same-strand | Polysaccharide biosynthesis protein |
| 10 | PF14667.8 | 0.69 | 301 | 1463 | same-strand | Polysaccharide biosynthesis C-terminal domain |
++ More..