* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_007633.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF16193.7
|
0.67
|
2
|
3927.0
|
same-strand
|
AAA C-terminal domain
|
2
|
PF00004.31
|
0.67
|
2
|
3874
|
same-strand
|
ATPase family associated with various cellular activities (AAA)
|
3
|
PF13173.8
|
0.67
|
2
|
3927.0
|
same-strand
|
AAA domain
|
4
|
PF05362.15
|
1.0
|
3
|
2634
|
same-strand
|
Lon protease (S16) C-terminal proteolytic domain
|
5
|
PF13541.8
|
1.0
|
3
|
2634
|
same-strand
|
Subunit ChlI of Mg-chelatase
|
6
|
PF05698.16
|
1.0
|
3
|
452
|
same-strand
|
Bacterial trigger factor protein (TF) C-terminus
|
7
|
PF09285.13
|
1.0
|
3
|
18
|
same-strand
|
Elongation factor P, C-terminal
|
8
|
PF08207.14
|
1.0
|
3
|
276
|
same-strand
|
Elongation factor P (EF-P) KOW-like domain
|
9
|
PF00551.21
|
1.0
|
3
|
968
|
same-strand
|
Formyl transferase
|
10
|
PF11074.10
|
1.0
|
3
|
1887
|
same-strand
|
Domain of unknown function(DUF2779)
|
++ More..