* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_017379.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF12163.10
|
0.67
|
2
|
3318.5
|
opposite-strand
|
DNA replication regulator
|
2
|
PF00809.24
|
0.67
|
2
|
1526.5
|
opposite-strand
|
Pterin binding enzyme
|
3
|
PF00892.22
|
1.0
|
3
|
-149
|
opposite-strand
|
EamA-like transporter family
|
4
|
PF13536.8
|
0.67
|
2
|
-149.0
|
opposite-strand
|
Putative multidrug resistance efflux transporter
|
5
|
PF04368.15
|
1.0
|
3
|
1384
|
opposite-strand
|
Protein of unknown function (DUF507)
|
6
|
PF00117.30
|
1.0
|
3
|
1935
|
opposite-strand
|
Glutamine amidotransferase class-I
|
7
|
PF00988.24
|
1.0
|
3
|
1935
|
opposite-strand
|
Carbamoyl-phosphate synthase small chain, CPSase domain
|
++ More..