* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_017379.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF04101.18
|
0.67
|
2
|
7107.5
|
opposite-strand
|
Glycosyltransferase family 28 C-terminal domain
|
2
|
PF03033.22
|
0.67
|
2
|
7107.5
|
opposite-strand
|
Glycosyltransferase family 28 N-terminal domain
|
3
|
PF01856.19
|
1.0
|
3
|
4911
|
opposite-strand
|
Helicobacter outer membrane protein
|
4
|
PF14748.8
|
0.67
|
2
|
410.5
|
opposite-strand
|
Pyrroline-5-carboxylate reductase dimerisation
|
5
|
PF03807.19
|
0.67
|
2
|
410.5
|
opposite-strand
|
NADP oxidoreductase coenzyme F420-dependent
|
6
|
PF02661.20
|
0.67
|
2
|
-113.0
|
opposite-strand
|
Fic/DOC family
|
7
|
PF00258.27
|
0.67
|
2
|
1233.5
|
same-strand
|
Flavodoxin
|
8
|
PF09335.13
|
0.67
|
2
|
1824.0
|
same-strand
|
SNARE associated Golgi protein
|
++ More..