* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_022369.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF08951.12
|
1.0
|
2
|
2095.0
|
same-strand
|
Enterocin A Immunity
|
2
|
PF01625.23
|
1.0
|
2
|
524.0
|
opposite-strand
|
Peptide methionine sulfoxide reductase
|
3
|
PF00005.29
|
1.0
|
2
|
2.0
|
same-strand
|
ABC transporter
|
4
|
PF16326.7
|
1.0
|
2
|
2.0
|
same-strand
|
ABC transporter C-terminal domain
|
5
|
PF12848.9
|
1.0
|
2
|
2.0
|
same-strand
|
ABC transporter
|
6
|
PF00465.21
|
1.0
|
2
|
4061.0
|
same-strand
|
Iron-containing alcohol dehydrogenase
|
7
|
PF13685.8
|
1.0
|
2
|
4061.0
|
same-strand
|
Iron-containing alcohol dehydrogenase
|
++ More..