Protein Information |
Information Type | Description |
---|---|
Protein name | EXP01296 |
NCBI Accession ID | NC_017381.1 |
Organism | Helicobacter pylori 2018 |
Left | 64775 |
Right | 64966 |
Strand | + |
Nucleotide Sequence | TTGCTAAACGAGGAAGTGAATAGCTTGAGCGGCCATTTCCATAATTTAGAATCATGGCAAGACGCTAGGAGGGATAAATTTAGCGAGGTGCTGGATAATTTGAAAAGCACTTTCAATGAATTTGATGAAGCCGCGCAAGAGCAAATCGCATGGCTTAAAGAGAGGATTAGGGTTTTAGAGGAAGATTATTAG |
Sequence | LLNEEVNSLSGHFHNLESWQDARRDKFSEVLDNLKSTFNEFDEAAQEQIAWLKERIRVLEEDY |
Source of smORF | Protein-level |
Function | |
Pubmed ID | 30796087 |
Domain | |
Functional Category | Function not yet assigned |
Uniprot ID | |
ORF Length (Amino Acid) | 63 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 62800 | 62967 | + | NC_017379.1 | Helicobacter pylori Puno135 |
2 | 171806 | 171982 | + | NC_014810.2 | Helicobacter felis ATCC 49179 |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF09346.12 | 1.0 | 2 | 1156.0 | same-strand | SMI1 / KNR4 family (SUKH-1) |
2 | PF14568.8 | 1.0 | 2 | 1156.0 | same-strand | SMI1-KNR4 cell-wall |
3 | PF01580.20 | 1.0 | 2 | 1880.5 | same-strand | FtsK/SpoIIIE family |
4 | PF13401.8 | 1.0 | 2 | 1880.5 | same-strand | AAA domain |