Result : EXP01266
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP01266 |
| NCBI Accession ID | NC_017502.1 |
| Organism | Mycoplasma gallisepticum R(high) |
| Left | 341308 |
| Right | 341568 |
| Strand | + |
| Nucleotide Sequence | TTGATGGATTCTAATAATAAAAAAAGTAAAACTATCCGTTTTAATACATCTTCTAAAGATCTAGAGAAGTTCGAACGTGTTAAGTTAGAAGACACCAAAGTTTTTAACATGGAAGACAGGCTTCTTCAGATCGAACTGCAAGAAAAAATCATTAATCTAACTGCTGAATTAGAAAATTCAACGGATAAGCAAGCTCGCAAAGAACTTAAACAAGAGATCAAAGAATTACAAAAGCGATTAGCTAAATTGAGCGAACAATAA |
| Sequence | LMDSNNKKSKTIRFNTSSKDLEKFERVKLEDTKVFNMEDRLLQIELQEKIINLTAELENSTDKQARKELKQEIKELQKRLAKLSEQ |
| Source of smORF | Protein-level |
| Function | |
| Pubmed ID | 30796087 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 86 |
++ More..
| Conservation Analysis |
No. of Species: 2
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 337627 | 337887 | + | NC_018406.1 | Mycoplasma gallisepticum VA94_7994-1-7P |
| 2 | 268181 | 268444 | + | NZ_CP059674.1 | Mycoplasma tullyi |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_018406.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF17657.3 | 1.0 | 2 | 1256.5 | same-strand | Bacterial DNA polymerase III alpha subunit finger domain |
| 2 | PF02739.18 | 1.0 | 2 | 3093.0 | same-strand | 5'-3' exonuclease, N-terminal resolvase-like domain |
| 3 | PF01367.22 | 1.0 | 2 | 3093.0 | same-strand | 5'-3' exonuclease, C-terminal SAM fold |
++ More..