Protein Information |
Information Type | Description |
---|---|
Protein name | EXP01266 |
NCBI Accession ID | NC_017502.1 |
Organism | Mycoplasma gallisepticum R(high) |
Left | 341308 |
Right | 341568 |
Strand | + |
Nucleotide Sequence | TTGATGGATTCTAATAATAAAAAAAGTAAAACTATCCGTTTTAATACATCTTCTAAAGATCTAGAGAAGTTCGAACGTGTTAAGTTAGAAGACACCAAAGTTTTTAACATGGAAGACAGGCTTCTTCAGATCGAACTGCAAGAAAAAATCATTAATCTAACTGCTGAATTAGAAAATTCAACGGATAAGCAAGCTCGCAAAGAACTTAAACAAGAGATCAAAGAATTACAAAAGCGATTAGCTAAATTGAGCGAACAATAA |
Sequence | LMDSNNKKSKTIRFNTSSKDLEKFERVKLEDTKVFNMEDRLLQIELQEKIINLTAELENSTDKQARKELKQEIKELQKRLAKLSEQ |
Source of smORF | Protein-level |
Function | |
Pubmed ID | 30796087 |
Domain | |
Functional Category | Function not yet assigned |
Uniprot ID | |
ORF Length (Amino Acid) | 86 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 337627 | 337887 | + | NC_018406.1 | Mycoplasma gallisepticum VA94_7994-1-7P |
2 | 268181 | 268444 | + | NZ_CP059674.1 | Mycoplasma tullyi |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF17657.3 | 1.0 | 2 | 1256.5 | same-strand | Bacterial DNA polymerase III alpha subunit finger domain |
2 | PF02739.18 | 1.0 | 2 | 3093.0 | same-strand | 5'-3' exonuclease, N-terminal resolvase-like domain |
3 | PF01367.22 | 1.0 | 2 | 3093.0 | same-strand | 5'-3' exonuclease, C-terminal SAM fold |