* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP032627.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF03932.16
|
1.0
|
3
|
3010
|
same-strand
|
CutC family
|
2
|
PF00005.29
|
1.0
|
3
|
1761.0
|
opposite-strand
|
ABC transporter
|
3
|
PF01230.25
|
1.0
|
3
|
15
|
same-strand
|
HIT domain
|
4
|
PF11969.10
|
1.0
|
3
|
15
|
same-strand
|
Scavenger mRNA decapping enzyme C-term binding
|
5
|
PF00687.23
|
0.67
|
2
|
436.0
|
opposite-strand
|
Ribosomal protein L1p/L10e family
|
6
|
PF03946.16
|
0.67
|
2
|
1419.0
|
opposite-strand
|
Ribosomal protein L11, N-terminal domain
|
7
|
PF00298.21
|
0.67
|
2
|
1419.0
|
opposite-strand
|
Ribosomal protein L11, RNA binding domain
|
8
|
PF08241.14
|
0.67
|
2
|
3490.0
|
opposite-strand
|
Methyltransferase domain
|
9
|
PF13649.8
|
0.67
|
2
|
3490.0
|
opposite-strand
|
Methyltransferase domain
|
++ More..