Protein Information |
Information Type | Description |
---|---|
Protein name | EXP01263 |
NCBI Accession ID | NC_017381.1 |
Organism | Helicobacter pylori 2018 |
Left | 1048248 |
Right | 1048478 |
Strand | - |
Nucleotide Sequence | ATGATGCAATCTTTAAGTTTATTAAACCAGTTGGGTGCTAAAATTGATGAATTGATTGAAAAAATCCAAAAACAAGAAGAAGAGTTGAACGCTTTACGCCAAGCAAACACCACCCTAAATGCACAAAATGAAGAAAAAGACATTCAAATCGCTATTTTATACGATGAATTGAGCGCTAAAGATAAGGGTATTCAAGGTCTTTATGACAAAATCTCTGATTTATTGTCATAA |
Sequence | MMQSLSLLNQLGAKIDELIEKIQKQEEELNALRQANTTLNAQNEEKDIQIAILYDELSAKDKGIQGLYDKISDLLS |
Source of smORF | Protein-level |
Function | |
Pubmed ID | 30796087 |
Domain | |
Functional Category | Function not yet assigned |
Uniprot ID | |
ORF Length (Amino Acid) | 76 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 1117548 | 1117775 | - | NC_017379.1 | Helicobacter pylori Puno135 |
2 | 366941 | 367168 | - | NC_008229.1 | Helicobacter acinonychis str. Sheeba |
3 | 1581116 | 1581343 | - | NC_017735.1 | Helicobacter cetorum MIT 99-5656 |
4 | 1338623 | 1338850 | - | NC_014810.2 | Helicobacter felis ATCC 49179 |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF00270.31 | 0.75 | 3 | 234 | same-strand | DEAD/DEAH box helicase |
2 | PF04851.17 | 0.75 | 3 | 234 | same-strand | Type III restriction enzyme, res subunit |
3 | PF18074.3 | 0.75 | 3 | 234 | same-strand | Primosomal protein N C-terminal domain |
4 | PF18319.3 | 0.75 | 3 | 234 | same-strand | PriA DNA helicase Cys-rich region (CRR) domain |
5 | PF17764.3 | 0.75 | 3 | 234 | same-strand | 3'DNA-binding domain (3'BD) |