* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP032627.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00709.23
|
0.75
|
3
|
3883
|
opposite-strand
|
Adenylosuccinate synthetase
|
2
|
PF01430.21
|
0.75
|
3
|
2048
|
same-strand
|
Hsp33 protein
|
3
|
PF01207.19
|
1.0
|
4
|
93.5
|
same-strand
|
Dihydrouridine synthase (Dus)
|
4
|
PF02588.17
|
1.0
|
4
|
1150
|
opposite-strand
|
Uncharacterised 5xTM membrane BCR, YitT family COG1284
|
5
|
PF10035.11
|
1.0
|
4
|
1150
|
opposite-strand
|
Uncharacterized protein conserved in bacteria (DUF2179)
|
6
|
PF00152.22
|
0.75
|
3
|
2963
|
opposite-strand
|
tRNA synthetases class II (D, K and N)
|
7
|
PF02938.16
|
0.75
|
3
|
2963
|
opposite-strand
|
GAD domain
|
8
|
PF01336.27
|
0.75
|
3
|
2963
|
opposite-strand
|
OB-fold nucleic acid binding domain
|
++ More..