Result : EXP01226
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP01226 |
| NCBI Accession ID | NC_017502.1 |
| Organism | Mycoplasma gallisepticum R(high) |
| Left | 629987 |
| Right | 630271 |
| Strand | + |
| Nucleotide Sequence | ATGAATTTTAAACTTACTCACCACTCACGGATTAGAGCAGTTCAACGCTTAGTTTTACAAGAAAAAAGTGAACTTTTCATTGATCATGAGATCAATGAAATCTTAAGAGATCTAATCCCATATTATGTTGATAAGAAGAATTTTGCTTATTTTGAGATTCCCAAAAAATTCTTAATTGATCGCCATAAAAGAACATATGCCATTGTTGATCAGAACAACGGCATCATTACTAGTATTACACCGATCTCACCAAGTAAGTTTATTAAGATTTATAGTATGAATTAA |
| Sequence | MNFKLTHHSRIRAVQRLVLQEKSELFIDHEINEILRDLIPYYVDKKNFAYFEIPKKFLIDRHKRTYAIVDQNNGIITSITPISPSKFIKIYSMN |
| Source of smORF | Protein-level |
| Function | |
| Pubmed ID | 30796087 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 94 |
++ More..
| Conservation Analysis |
No. of Species: 2
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 588729 | 589013 | + | NC_018406.1 | Mycoplasma gallisepticum VA94_7994-1-7P |
| 2 | 541471 | 541755 | + | NZ_CP059674.1 | Mycoplasma tullyi |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_018406.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF02274.19 | 1.0 | 2 | 708.5 | opposite-strand | Arginine deiminase |
| 2 | PF00485.20 | 1.0 | 2 | 140.0 | same-strand | Phosphoribulokinase / Uridine kinase family |
| 3 | PF01926.25 | 1.0 | 2 | 156.0 | opposite-strand | 50S ribosome-binding GTPase |
++ More..