Protein Information |
Information Type | Description |
---|---|
Protein name | EXP01226 |
NCBI Accession ID | NC_017502.1 |
Organism | Mycoplasma gallisepticum R(high) |
Left | 629987 |
Right | 630271 |
Strand | + |
Nucleotide Sequence | ATGAATTTTAAACTTACTCACCACTCACGGATTAGAGCAGTTCAACGCTTAGTTTTACAAGAAAAAAGTGAACTTTTCATTGATCATGAGATCAATGAAATCTTAAGAGATCTAATCCCATATTATGTTGATAAGAAGAATTTTGCTTATTTTGAGATTCCCAAAAAATTCTTAATTGATCGCCATAAAAGAACATATGCCATTGTTGATCAGAACAACGGCATCATTACTAGTATTACACCGATCTCACCAAGTAAGTTTATTAAGATTTATAGTATGAATTAA |
Sequence | MNFKLTHHSRIRAVQRLVLQEKSELFIDHEINEILRDLIPYYVDKKNFAYFEIPKKFLIDRHKRTYAIVDQNNGIITSITPISPSKFIKIYSMN |
Source of smORF | Protein-level |
Function | |
Pubmed ID | 30796087 |
Domain | |
Functional Category | Function not yet assigned |
Uniprot ID | |
ORF Length (Amino Acid) | 94 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 588729 | 589013 | + | NC_018406.1 | Mycoplasma gallisepticum VA94_7994-1-7P |
2 | 541471 | 541755 | + | NZ_CP059674.1 | Mycoplasma tullyi |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF02274.19 | 1.0 | 2 | 708.5 | opposite-strand | Arginine deiminase |
2 | PF00485.20 | 1.0 | 2 | 140.0 | same-strand | Phosphoribulokinase / Uridine kinase family |
3 | PF01926.25 | 1.0 | 2 | 156.0 | opposite-strand | 50S ribosome-binding GTPase |