Result : EXP01206
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP01206 |
| NCBI Accession ID | BA000022.2 |
| Organism | Synechocystis sp. PCC 6803 |
| Left | 209527 |
| Right | 209826 |
| Strand | - |
| Nucleotide Sequence | ATGGCTCAAAAAGATAACTTCGCCGGAGGATTTTTATTAGGTACGGTCATTGGTGGCGTAGTGGGGGGAATTTTGGGTTCTGTCCTGGCCAATCGAGCTGCTACCCAAAGCCCCGACCGGGAAAAATTAGACACTGAGGGGGTAGGAAATCTCGATAGTGAGGAAAATATTGAGTTGGCTCGCCGTCGCCTGGAAGACAAAATTGCCCAACTTAATTTGGTTATCGACGATGTCCGTGACCAGTTGGGCCACGTCAATGAATTAAACAATATCAAGGAAGTACAAGAAGAACATCGCTAA |
| Sequence | MAQKDNFAGGFLLGTVIGGVVGGILGSVLANRAATQSPDREKLDTEGVGNLDSEENIELARRRLEDKIAQLNLVIDDVRDQLGHVNELNNIKEVQEEHR |
| Source of smORF | Protein-level |
| Function | integral component of membrane [GO:0016021]; plasma membrane-derived thylakoid membrane [GO:0031676] |
| Pubmed ID | 30796087 |
| Domain | |
| Functional Category | Gene Ontology/Expression based functional assignment |
| Uniprot ID | P72752 |
| ORF Length (Amino Acid) | 99 |
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| Conservation Analysis |
No. of Species: 9
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 1868099 | 1868386 | + | NC_014501.1 | Gloeothece verrucosa PCC 7822 |
| 2 | 3997395 | 3997682 | + | NC_019748.1 | Stanieria cyanosphaera PCC 7437 |
| 3 | 2459904 | 2460191 | - | NC_010296.1 | Microcystis aeruginosa NIES-843 |
| 4 | 1968384 | 1968671 | + | NC_010296.1 | Microcystis aeruginosa NIES-843 |
| 5 | 2628736 | 2629047 | + | NZ_CP021983.2 | Halomicronema hongdechloris C2206 |
| 6 | 1481756 | 1482022 | - | NZ_CP042326.1 | Euhalothece natronophila Z-M001 |
| 7 | 2750704 | 2751003 | - | NC_019689.1 | Pleurocapsa sp. PCC 7327 |
| 8 | 1708588 | 1708917 | + | NZ_AP014638.1 | Leptolyngbya boryana IAM M-101 |
| 9 | 2095428 | 2095778 | - | NC_019771.1 | Anabaena cylindrica PCC 7122 |
| 10 | 3369978 | 3370316 | + | NZ_CP060822.1 | Cylindrospermopsis curvispora GIHE-G1 |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_014501.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF14681.8 | 1.0 | 9 | 42.0 | same-strand | Uracil phosphoribosyltransferase |
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