Result : EXP01194
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP01194 |
| NCBI Accession ID | AE015928.1 |
| Organism | Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) |
| Left | 4846330 |
| Right | 4846620 |
| Strand | - |
| Nucleotide Sequence | ATGAAAAAATTATTATTTGCGATTTTTGTAGTTACAACTATAATATCCTTCACGTCCTGTCGTAATAAAAAAGAACAGGATAAAGCGAAACAACAAGTTGAAAAAGTGAAAGAAAACGTCAATGATGCAGTGGACAAAGTATCCGATAAAATCGAAGATGGTGCTGATGCCGTAAAAGATGCGTGGAAAGACACCAAAAAAGACGTTCAAAACAGCGCAGAGAAAACCAAGAAAGAAATCAAGGAAGGATATAACGAAGTGAAAAAAGATGTAAGTAAAAAACTTGACTGA |
| Sequence | MKKLLFAIFVVTTIISFTSCRNKKEQDKAKQQVEKVKENVNDAVDKVSDKIEDGADAVKDAWKDTKKDVQNSAEKTKKEIKEGYNEVKKDVSKKLD |
| Source of smORF | Protein-level |
| Function | |
| Pubmed ID | 31841667 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 96 |
++ More..
| Conservation Analysis |
No. of Species: 2
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2147709 | 2147999 | - | NZ_CP040530.1 | Bacteroides thetaiotaomicron |
| 2 | 2643355 | 2643603 | - | NZ_CP015401.2 | Bacteroides caecimuris |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP040530.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF12732.9 | 1.0 | 2 | 600.0 | same-strand | YtxH-like protein |
++ More..