* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP036345.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00069.27
|
1.0
|
2
|
2812.5
|
same-strand
|
Protein kinase domain
|
2
|
PF13672.8
|
1.0
|
2
|
2061.5
|
same-strand
|
Protein phosphatase 2C
|
3
|
PF00392.23
|
1.0
|
2
|
1561.5
|
opposite-strand
|
Bacterial regulatory proteins, gntR family
|
4
|
PF00005.29
|
1.0
|
2
|
845.5
|
opposite-strand
|
ABC transporter
|
5
|
PF14821.8
|
1.0
|
2
|
1417.5
|
same-strand
|
Threonine synthase N terminus
|
6
|
PF00291.27
|
1.0
|
2
|
1417.5
|
same-strand
|
Pyridoxal-phosphate dependent enzyme
|
7
|
PF01546.30
|
1.0
|
2
|
3060.5
|
same-strand
|
Peptidase family M20/M25/M40
|
8
|
PF07687.16
|
1.0
|
2
|
3060.5
|
same-strand
|
Peptidase dimerisation domain
|
++ More..