Result : EXP01184
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP01184 |
| NCBI Accession ID | CP036346.1 |
| Organism | Erysipelatoclostridium ramosum DSM 1402 |
| Left | 3132766 |
| Right | 3133038 |
| Strand | - |
| Nucleotide Sequence | ATGGCATTATTTGATGATCTAAGTAAAAAAGCAGCAAAACTGACAGAAAAAACAATTGAAAAATCATCTGAATTAGCGGATGTCGCGAAAACGAGAGTGAGTATAAAAAGTGCTCAGGCTGATTTAGATGAGAAGTTTATTGAATTAGGCAAACTGTATTATGAAATTATTAGTAATGATAATATTTTTGATGAAAAGACAGCAGCAATCGTTCAGGAAATTGACAGTATTAATACACGAATAAAAGAATTAGAAGCAAATTTGGATAAATAA |
| Sequence | MALFDDLSKKAAKLTEKTIEKSSELADVAKTRVSIKSAQADLDEKFIELGKLYYEIISNDNIFDEKTAAIVQEIDSINTRIKELEANLDK |
| Source of smORF | Protein-level |
| Function | |
| Pubmed ID | 31841667 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 90 |
++ More..
| Conservation Analysis |
No. of Species: 2
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 2964341 | 2964613 | + | NZ_CP068170.1 | Erysipelatoclostridium ramosum |
| 2 | 405068 | 405343 | + | NZ_AP024085.1 | Faecalibacillus intestinalis |
++ More..
| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP068170.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF13419.8 | 1.0 | 2 | 4264.0 | both-strands | Haloacid dehalogenase-like hydrolase |
| 2 | PF00702.28 | 1.0 | 2 | 4264.0 | both-strands | haloacid dehalogenase-like hydrolase |
++ More..