* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_021184.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF04055.23
|
1.0
|
4
|
1337.0
|
same-strand
|
Radical SAM superfamily
|
2
|
PF09719.12
|
1.0
|
4
|
612
|
same-strand
|
Putative redox-active protein (C GCAxxG C C)
|
3
|
PF08241.14
|
1.0
|
4
|
50.0
|
same-strand
|
Methyltransferase domain
|
4
|
PF13649.8
|
1.0
|
4
|
50.0
|
same-strand
|
Methyltransferase domain
|
5
|
PF13534.8
|
1.0
|
4
|
6
|
same-strand
|
4Fe-4S dicluster domain
|
6
|
PF02754.18
|
1.0
|
4
|
6
|
same-strand
|
Cysteine-rich domain
|
7
|
PF13183.8
|
0.75
|
3
|
46.0
|
same-strand
|
4Fe-4S dicluster domain
|
8
|
PF13237.8
|
0.75
|
3
|
0
|
same-strand
|
4Fe-4S dicluster domain
|
9
|
PF02738.20
|
1.0
|
4
|
2475.5
|
same-strand
|
Molybdopterin-binding domain of aldehyde dehydrogenase
|
10
|
PF01799.22
|
1.0
|
4
|
2475.5
|
same-strand
|
[2Fe-2S] binding domain
|
11
|
PF01315.24
|
1.0
|
4
|
2475.5
|
same-strand
|
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
|
12
|
PF00994.26
|
0.75
|
3
|
5563
|
same-strand
|
Probable molybdopterin binding domain
|
13
|
PF08242.14
|
0.75
|
3
|
95
|
same-strand
|
Methyltransferase domain
|
14
|
PF13478.8
|
0.75
|
3
|
4128
|
same-strand
|
XdhC Rossmann domain
|
15
|
PF02625.18
|
0.75
|
3
|
4128
|
same-strand
|
XdhC and CoxI family
|
++ More..