Protein Information |
Information Type | Description |
---|---|
Protein name | EXP01151 |
NCBI Accession ID | ABAX03000012.1 |
Organism | Anaerostipes caccae (strain DSM 14662 / NCIMB 13811 / L1-92) |
Left | 446634 |
Right | 446852 |
Strand | + |
Nucleotide Sequence | ATGAAAATCTATACAGAAGTACAGTTTCAGAGTCACAATGTGCTCGTCGCAGATGTGGAAAAGGCAGTGAAGGAGGACATCAAATCAAAAGGTGTAAAATTAAATTCCCTGTCATCATTGGAAATCTATTATCAGCCGGAAAATTTGTCTGTATTTTATGTGGCAAAAGCAAAAGACGGCACTTCTATTTCTAATGAGGAACCGCTGAGCCTTGAATAA |
Sequence | MKIYTEVQFQSHNVLVADVEKAVKEDIKSKGVKLNSLSSLEIYYQPENLSVFYVAKAKDGTSISNEEPLSLE |
Source of smORF | Protein-level |
Function | |
Pubmed ID | 31841667 |
Domain | |
Functional Category | Function not yet assigned |
Uniprot ID | |
ORF Length (Amino Acid) | 72 |
Conservation Analysis |
Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
---|---|---|---|---|---|
1 | 1858673 | 1858891 | + | NZ_CP036345.1 | Anaerostipes caccae L1-92 |
2 | 1943638 | 1943856 | + | NZ_CP040058.1 | Anaerostipes rhamnosivorans |
3 | 299807 | 300025 | + | NZ_CP068170.1 | Erysipelatoclostridium ramosum |
Neighborhood Conservation Analysis |
Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
---|---|---|---|---|---|---|
1 | PF00005.29 | 0.67 | 2 | 5315 | same-strand | ABC transporter |
2 | PF01022.22 | 0.67 | 2 | 1475.5 | opposite-strand | Bacterial regulatory protein, arsR family |
3 | PF12840.9 | 0.67 | 2 | 1475.5 | opposite-strand | Helix-turn-helix domain |