Result : EXP01129
| Protein Information |
| Information Type | Description |
|---|---|
| Protein name | EXP01129 |
| NCBI Accession ID | ABAX03000005.1 |
| Organism | Anaerostipes caccae (strain DSM 14662 / NCIMB 13811 / L1-92) |
| Left | 34599 |
| Right | 34772 |
| Strand | - |
| Nucleotide Sequence | ATGCGGAGAGAACAAACGATGTATAGTGTGGAAGAATTTGCATGCAGCCCGGAAGTGCTGGAAGCATCTGAAGATTTAATCAGAGCAGCTTTTTCTTATGCAGGATTAGAGGAAGCAACCGAGAAAAAAGCAAAAAAAATAATCAGAGAATTTAAAAATAAGGAGGTACATTAA |
| Sequence | MRREQTMYSVEEFACSPEVLEASEDLIRAAFSYAGLEEATEKKAKKIIREFKNKEVH |
| Source of smORF | Protein-level |
| Function | |
| Pubmed ID | 31841667 |
| Domain | |
| Functional Category | Function not yet assigned |
| Uniprot ID | |
| ORF Length (Amino Acid) | 57 |
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| Conservation Analysis |
No. of Species: 2
| Sr.No. | Left Position | Right Position | Strand | NCBI Accession id | Species Name |
|---|---|---|---|---|---|
| 1 | 705570 | 705743 | + | NZ_CP036345.1 | Anaerostipes caccae L1-92 |
| 2 | 2969460 | 2969606 | - | NZ_CP040058.1 | Anaerostipes rhamnosivorans |
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| Neighborhood Conservation Analysis |
* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP036345.1
| Sr.No. | Domain | Co-occurrence Frequency | No. of species in which domain occurs with smORF | Median distance b/w smORF and domain bearing ORFs | Orientation relative to smORF | PFAM Information |
|---|---|---|---|---|---|---|
| 1 | PF04984.16 | 1.0 | 2 | 4.0 | same-strand | Phage tail sheath protein subtilisin-like domain |
| 2 | PF09393.12 | 1.0 | 2 | 1428.5 | same-strand | Phage tail tube protein |
++ More..