* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000913.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF11563.10
|
0.67
|
2
|
38.0
|
same-strand
|
Protoglobin
|
2
|
PF02638.17
|
1.0
|
3
|
285
|
same-strand
|
Glycosyl hydrolase-like 10
|
3
|
PF13520.8
|
1.0
|
3
|
1735
|
same-strand
|
Amino acid permease
|
4
|
PF00324.23
|
1.0
|
3
|
1735
|
same-strand
|
Amino acid permease
|
5
|
PF00282.21
|
1.0
|
3
|
3426
|
same-strand
|
Pyridoxal-dependent decarboxylase conserved domain
|
6
|
PF05193.23
|
0.67
|
2
|
5618.0
|
same-strand
|
Peptidase M16 inactive domain
|
7
|
PF00675.22
|
0.67
|
2
|
5618.0
|
same-strand
|
Insulinase (Peptidase family M16)
|
++ More..