* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000913.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF02913.21
|
1.0
|
2
|
3802.5
|
opposite-strand
|
FAD linked oxidases, C-terminal domain
|
2
|
PF13394.8
|
1.0
|
2
|
139.0
|
opposite-strand
|
4Fe-4S single cluster domain
|
3
|
PF00113.24
|
1.0
|
2
|
1314.5
|
opposite-strand
|
Enolase, C-terminal TIM barrel domain
|
4
|
PF03952.18
|
1.0
|
2
|
1314.5
|
opposite-strand
|
Enolase, N-terminal domain
|
5
|
PF06418.16
|
1.0
|
2
|
2700.5
|
opposite-strand
|
CTP synthase N-terminus
|
6
|
PF00117.30
|
1.0
|
2
|
2700.5
|
opposite-strand
|
Glutamine amidotransferase class-I
|
7
|
PF03819.19
|
1.0
|
2
|
4565.5
|
opposite-strand
|
MazG nucleotide pyrophosphohydrolase domain
|
++ More..