* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000913.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00384.24
|
0.67
|
2
|
4830
|
same-strand
|
Molybdopterin oxidoreductase
|
2
|
PF01568.23
|
0.67
|
2
|
4830
|
same-strand
|
Molydopterin dinucleotide binding domain
|
3
|
PF18364.3
|
0.67
|
2
|
4830
|
same-strand
|
Molybdopterin oxidoreductase N-terminal domain
|
4
|
PF03264.16
|
0.67
|
2
|
3705
|
same-strand
|
NapC/NirT cytochrome c family, N-terminal region
|
5
|
PF03932.16
|
1.0
|
3
|
2571.0
|
same-strand
|
CutC family
|
6
|
PF06185.14
|
1.0
|
3
|
1991.0
|
same-strand
|
YecM protein
|
7
|
PF00750.21
|
1.0
|
3
|
42.0
|
opposite-strand
|
tRNA synthetases class I (R)
|
8
|
PF05746.17
|
1.0
|
3
|
42.0
|
opposite-strand
|
DALR anticodon binding domain
|
9
|
PF03485.18
|
1.0
|
3
|
42.0
|
opposite-strand
|
Arginyl tRNA synthetase N terminal domain
|
10
|
PF07007.14
|
0.67
|
2
|
91
|
opposite-strand
|
Lysozyme inhibitor LprI
|
11
|
PF06366.15
|
1.0
|
3
|
1088.5
|
same-strand
|
Flagellar protein FlhE
|
++ More..