* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_011916.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF03652.17
|
1.0
|
2
|
2089.0
|
same-strand
|
Holliday junction resolvase
|
2
|
PF02729.23
|
1.0
|
2
|
-3.0
|
same-strand
|
Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
|
3
|
PF00185.26
|
1.0
|
2
|
-3.0
|
same-strand
|
Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
|
4
|
PF01979.22
|
1.0
|
2
|
-3.0
|
same-strand
|
Amidohydrolase family
|
5
|
PF02660.17
|
1.0
|
2
|
3739.5
|
same-strand
|
Glycerol-3-phosphate acyltransferase
|
6
|
PF08242.14
|
1.0
|
2
|
3678.0
|
both-strands
|
Methyltransferase domain
|
7
|
PF08241.14
|
1.0
|
2
|
3678.0
|
both-strands
|
Methyltransferase domain
|
8
|
PF13649.8
|
1.0
|
2
|
3678.0
|
both-strands
|
Methyltransferase domain
|
++ More..