* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00793.22
|
0.67
|
2
|
2227
|
same-strand
|
DAHP synthetase I family
|
2
|
PF10973.10
|
0.67
|
2
|
1652
|
opposite-strand
|
Protein of unknown function (DUF2799)
|
3
|
PF13689.8
|
0.67
|
2
|
984
|
opposite-strand
|
YfiR/HmsC-like
|
4
|
PF00990.23
|
1.0
|
3
|
-62.0
|
opposite-strand
|
Diguanylate cyclase, GGDEF domain
|
5
|
PF00691.22
|
1.0
|
3
|
186.0
|
opposite-strand
|
OmpA family
|
6
|
PF01245.22
|
1.0
|
3
|
744.5
|
same-strand
|
Ribosomal protein L19
|
7
|
PF01746.23
|
1.0
|
3
|
1133.5
|
same-strand
|
tRNA (Guanine-1)-methyltransferase
|
8
|
PF01782.20
|
1.0
|
3
|
1931.5
|
same-strand
|
RimM N-terminal domain
|
9
|
PF05239.18
|
1.0
|
3
|
1931.5
|
same-strand
|
PRC-barrel domain
|
10
|
PF00886.21
|
0.67
|
2
|
2499
|
same-strand
|
Ribosomal protein S16
|
++ More..