* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_CP017279.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00359.24
|
0.67
|
2
|
4397.5
|
same-strand
|
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
|
2
|
PF13847.8
|
1.0
|
3
|
136.5
|
same-strand
|
Methyltransferase domain
|
3
|
PF13649.8
|
1.0
|
3
|
136.5
|
same-strand
|
Methyltransferase domain
|
4
|
PF08241.14
|
1.0
|
3
|
136.5
|
same-strand
|
Methyltransferase domain
|
5
|
PF08242.14
|
1.0
|
3
|
136.5
|
same-strand
|
Methyltransferase domain
|
6
|
PF09857.11
|
1.0
|
3
|
1784.0
|
same-strand
|
Putative toxin of bacterial toxin-antitoxin pair
|
7
|
PF12674.9
|
0.67
|
2
|
-134
|
same-strand
|
Putative zinc ribbon domain
|
++ More..