* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF08971.13
|
1.0
|
5
|
-56.0
|
same-strand
|
Glycogen synthesis protein
|
2
|
PF07290.13
|
0.6
|
3
|
381.0
|
opposite-strand
|
Protein of unknown function (DUF1449)
|
3
|
PF15975.7
|
0.8
|
4
|
1037
|
opposite-strand
|
Flotillin
|
4
|
PF01145.27
|
0.6
|
3
|
1037.0
|
opposite-strand
|
SPFH domain / Band 7 family
|
5
|
PF00294.26
|
0.8
|
4
|
3490
|
same-strand
|
pfkB family carbohydrate kinase
|
6
|
PF01467.28
|
0.8
|
4
|
3490
|
same-strand
|
Cytidylyltransferase-like
|
7
|
PF03710.17
|
0.8
|
4
|
4971
|
same-strand
|
Glutamate-ammonia ligase adenylyltransferase
|
8
|
PF08335.13
|
0.8
|
4
|
4971
|
same-strand
|
GlnD PII-uridylyltransferase
|
9
|
PF01928.23
|
0.8
|
4
|
7834
|
same-strand
|
CYTH domain
|
10
|
PF04380.15
|
0.8
|
4
|
66.5
|
opposite-strand
|
Membrane fusogenic activity
|
11
|
PF00926.21
|
0.8
|
4
|
740.0
|
same-strand
|
3,4-dihydroxy-2-butanone 4-phosphate synthase
|
++ More..