* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF12697.9
|
1.0
|
3
|
3501.0
|
same-strand
|
Alpha/beta hydrolase family
|
2
|
PF12146.10
|
1.0
|
3
|
3501.0
|
same-strand
|
Serine aminopeptidase, S33
|
3
|
PF16582.7
|
1.0
|
3
|
1834.0
|
same-strand
|
Middle domain of thiamine pyrophosphate
|
4
|
PF02775.23
|
1.0
|
3
|
1834.0
|
same-strand
|
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
|
5
|
PF00425.20
|
1.0
|
3
|
450.0
|
same-strand
|
chorismate binding enzyme
|
6
|
PF19029.2
|
1.0
|
3
|
66.0
|
same-strand
|
DUF883 C-terminal glycine zipper region
|
7
|
PF05957.15
|
1.0
|
3
|
66.0
|
same-strand
|
DUF883 N-terminal domain
|
8
|
PF13673.9
|
1.0
|
3
|
-44.0
|
same-strand
|
Acetyltransferase (GNAT) domain
|
9
|
PF13508.9
|
1.0
|
3
|
-44.0
|
same-strand
|
Acetyltransferase (GNAT) domain
|
++ More..