* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_000913.3
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00994.26
|
1.0
|
6
|
1068
|
same-strand
|
Probable molybdopterin binding domain
|
2
|
PF07437.13
|
1.0
|
6
|
426
|
same-strand
|
YfaZ precursor
|
3
|
PF00293.30
|
1.0
|
6
|
-224
|
opposite-strand
|
NUDIX domain
|
4
|
PF14815.8
|
1.0
|
6
|
-224
|
opposite-strand
|
NUDIX domain
|
5
|
PF01041.19
|
0.67
|
4
|
985
|
opposite-strand
|
DegT/DnrJ/EryC1/StrS aminotransferase family
|
6
|
PF00535.28
|
0.67
|
4
|
2146
|
opposite-strand
|
Glycosyl transferase family 2
|
7
|
PF01370.23
|
0.67
|
4
|
3114
|
opposite-strand
|
NAD dependent epimerase/dehydratase family
|
8
|
PF16363.7
|
0.67
|
4
|
3114
|
opposite-strand
|
GDP-mannose 4,6 dehydratase
|
9
|
PF02911.20
|
0.67
|
4
|
3114
|
opposite-strand
|
Formyl transferase, C-terminal domain
|
10
|
PF01522.23
|
0.67
|
4
|
5092
|
opposite-strand
|
Polysaccharide deacetylase
|
++ More..