* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NZ_LR134340.1
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF07102.14
|
1.0
|
2
|
1087.0
|
opposite-strand
|
Protein of unknown function (DUF1364)
|
2
|
PF05866.13
|
1.0
|
2
|
728.0
|
opposite-strand
|
Endodeoxyribonuclease RusA
|
3
|
PF06530.14
|
1.0
|
2
|
128.0
|
opposite-strand
|
Phage antitermination protein Q
|
4
|
PF08212.14
|
1.0
|
2
|
-25.0
|
same-strand
|
Lipocalin-like domain
|
5
|
PF00061.25
|
1.0
|
2
|
-25.0
|
same-strand
|
Lipocalin / cytosolic fatty-acid binding protein family
|
6
|
PF08349.13
|
1.0
|
2
|
692.0
|
opposite-strand
|
Protein of unknown function (DUF1722)
|
7
|
PF04463.14
|
1.0
|
2
|
692.0
|
opposite-strand
|
2-thiouracil desulfurase
|
8
|
PF12833.9
|
1.0
|
2
|
2002.0
|
opposite-strand
|
Helix-turn-helix domain
|
9
|
PF04971.14
|
1.0
|
2
|
2922.0
|
opposite-strand
|
Bacteriophage P21 holin S
|
10
|
PF16080.7
|
1.0
|
2
|
2922.0
|
opposite-strand
|
Bacteriophage holin family HP1
|
11
|
PF00959.21
|
1.0
|
2
|
3137.0
|
opposite-strand
|
Phage lysozyme
|
++ More..