* Arrows marked in Genome Diagram shows ORFs; Multiple PFAMs can be mapped to a single ORF.
* 'Small ORF' represents the entry/query analyzed.
* Image generated using 'gggenes'(R-Package).
Neighborhood Representative Chosen(Species): NC_002695.2
Sr.No. |
Domain |
Co-occurrence Frequency |
No. of species in which domain occurs with smORF |
Median distance b/w smORF and domain bearing ORFs |
Orientation relative to smORF |
PFAM Information |
1
|
PF00483.25
|
0.75
|
3
|
5165
|
same-strand
|
Nucleotidyl transferase
|
2
|
PF00816.23
|
0.75
|
3
|
5101.5
|
opposite-strand
|
H-NS histone family
|
3
|
PF00265.20
|
0.75
|
3
|
3881.5
|
same-strand
|
Thymidine kinase
|
4
|
PF00465.21
|
1.0
|
4
|
393
|
opposite-strand
|
Iron-containing alcohol dehydrogenase
|
5
|
PF00171.24
|
1.0
|
4
|
393
|
opposite-strand
|
Aldehyde dehydrogenase family
|
6
|
PF01914.19
|
0.75
|
3
|
31.0
|
same-strand
|
MarC family integral membrane protein
|
7
|
PF00496.24
|
1.0
|
4
|
1513
|
same-strand
|
Bacterial extracellular solute-binding proteins, family 5 Middle
|
++ More..